Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0099
(642 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P0A1J7 Cluster: Flagella synthesis protein flgN; n=20; ... 136 4e-31
UniRef50_A7MG39 Cluster: Putative uncharacterized protein; n=1; ... 109 7e-23
UniRef50_P37169 Cluster: Virulence factor mviN; n=104; Proteobac... 64 4e-09
UniRef50_P96975 Cluster: Flagella synthesis protein flgN; n=1; P... 55 1e-06
UniRef50_P0C2V4 Cluster: Flagella synthesis protein flgN; n=17; ... 50 4e-05
UniRef50_Q6D6I2 Cluster: Flagella synthesis protein; n=1; Pectob... 44 0.003
UniRef50_Q7N5N6 Cluster: Flagella synthesis protein FlgN; n=1; P... 43 0.005
UniRef50_Q1GZW9 Cluster: FlgN; n=1; Methylobacillus flagellatus ... 37 0.36
UniRef50_A7K920 Cluster: Putative uncharacterized protein z410R;... 35 1.9
UniRef50_UPI00006D92DC Cluster: COG0697: Permeases of the drug/m... 34 2.5
UniRef50_A4HHR3 Cluster: Putative uncharacterized protein; n=3; ... 34 2.5
UniRef50_UPI0000498E47 Cluster: hypothetical protein 88.t00017; ... 34 3.4
UniRef50_A4FTT9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q9UB28 Cluster: Myotactin form B; n=6; cellular organis... 34 3.4
UniRef50_Q6PLR5 Cluster: Progesterone receptor isoform A; n=1; T... 34 3.4
UniRef50_Q1EQD4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.4
UniRef50_Q1D6S8 Cluster: Putative lipoprotein; n=1; Myxococcus x... 33 4.4
UniRef50_UPI00015BAFCE Cluster: membrane-bound dolichyl-phosphat... 33 5.9
UniRef50_A0Y689 Cluster: Putative cyanophycinase; n=1; Alteromon... 33 7.7
UniRef50_Q9HY59 Cluster: UPF0188 membrane protein PA3558; n=8; P... 33 7.7
>UniRef50_P0A1J7 Cluster: Flagella synthesis protein flgN; n=20;
Enterobacteriaceae|Rep: Flagella synthesis protein flgN
- Salmonella typhimurium
Length = 140
Score = 136 bits (329), Expect = 4e-31
Identities = 76/135 (56%), Positives = 92/135 (68%), Gaps = 4/135 (2%)
Frame = +1
Query: 22 LDQMSAVLNDLKTVMDQEQQHLSMGQINGQPVAMDYRTKKLTAGDAGLPRTVTQERTQYS 201
LDQM+ VLNDLKTVMD EQQ LS+GQING + T++ ++ A L Q R + +
Sbjct: 8 LDQMTTVLNDLKTVMDAEQQQLSVGQINGSQ--LQRITEEKSSLLATLDYLEQQRRLEQN 65
Query: 202 K*R*Y*STLAGNYC----ENAALRQMXQHNGWLLEGQIERNQQALEMLKPHQXPTLYGAN 369
R +A + + LR + QHNGWLLEGQIERNQQALE+LKPHQ PTLYGA+
Sbjct: 66 AQRSANDDIAERWQAITEKTQHLRDLNQHNGWLLEGQIERNQQALEVLKPHQEPTLYGAD 125
Query: 370 GQTSTTHRGGKKISI 414
GQTS +HRGGKKISI
Sbjct: 126 GQTSVSHRGGKKISI 140
>UniRef50_A7MG39 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 141
Score = 109 bits (261), Expect = 7e-23
Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 5/136 (3%)
Frame = +1
Query: 22 LDQMSAVLNDLKTVMDQEQQHLSMGQINGQPVAMDYRTKKLTAGDAGLPRTVTQERTQYS 201
LDQM+ VLN LK+VMD EQQ LS G +N A+ T++ ++ A L Q R++
Sbjct: 8 LDQMTTVLNSLKSVMDAEQQQLSAGSLNSS--ALQRITEEKSSLLATLDYLEQQRRSEQK 65
Query: 202 K*R*Y*STLAGNYC----ENAALRQMXQHNGWLLEGQIERNQQALEMLKPHQXPTLYGAN 369
R +A + + LR + HNGWLLEGQ+ RNQQAL +LKP Q P LYGAN
Sbjct: 66 THRDAPPDMAQRWQTITQKTLHLRDLNMHNGWLLEGQMARNQQALAVLKPMQEPALYGAN 125
Query: 370 GQTSTT-HRGGKKISI 414
GQT+ HRGGKKI+I
Sbjct: 126 GQTAANMHRGGKKIAI 141
>UniRef50_P37169 Cluster: Virulence factor mviN; n=104;
Proteobacteria|Rep: Virulence factor mviN - Salmonella
typhimurium
Length = 524
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -3
Query: 634 LVMSGVLLGMLHIMPEWSLGTMPLAFTRLMAVVLAGIAAYFAHWRXWASKLK 479
LVM+ VL G+LHIMPEWS G+M RLMAVV+AGIAAYFA K+K
Sbjct: 466 LVMAAVLFGVLHIMPEWSQGSMLWRLLRLMAVVIAGIAAYFAALAVLGFKVK 517
>UniRef50_P96975 Cluster: Flagella synthesis protein flgN; n=1;
Proteus mirabilis|Rep: Flagella synthesis protein flgN -
Proteus mirabilis
Length = 146
Score = 55.2 bits (127), Expect = 1e-06
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = +1
Query: 22 LDQMSAVLNDLKTVMDQEQQHLSMGQI--NGQPVAMDYRTKKLTA-GDAGLPRTVTQERT 192
LD + LN + ++ EQQ L G I N + + LTA G R + ++
Sbjct: 9 LDLQLSQLNTIAGILRAEQQLLCAGSIDINKLHEITEQKNFVLTALGHTDQKRQILSKQV 68
Query: 193 QYSK*---R*Y*STLAGNYCE-NAALRQMXQHNGWLLEGQIERNQQALEMLKPHQXPTLY 360
+ + + + L G + L+ + QHNG LLE I RN + L L+ + PTLY
Sbjct: 69 GIDRPYQGQPFLADLWGQLVDLTEELKHLNQHNGLLLEQHITRNSETLHFLQKNHSPTLY 128
Query: 361 GANGQTSTTHRGGKKISI 414
GA+GQ + G+KI I
Sbjct: 129 GADGQAQRSILAGRKIQI 146
>UniRef50_P0C2V4 Cluster: Flagella synthesis protein flgN; n=17;
Enterobacteriaceae|Rep: Flagella synthesis protein flgN
- Yersinia enterocolitica
Length = 147
Score = 50.4 bits (115), Expect = 4e-05
Identities = 46/139 (33%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Frame = +1
Query: 19 DLDQMSAVLNDLKTVMDQEQQHLSMGQING---QPVAMDYRTKKLTAGDAGLPRTVTQER 189
+L Q +L LKTV+ QEQQ L G+I G Q V + T R T++
Sbjct: 9 NLGQQLELLESLKTVVAQEQQLLCSGRIQGIVLQGVTEQKSSILATLAYLDQTRLTTEKN 68
Query: 190 TQYSK*R*Y*STLAGNY---CENA-ALRQMXQHNGWLLEGQIERNQQALEMLKPHQXPTL 357
LA + E A LR HNG LL+ IE N QAL +L +L
Sbjct: 69 INIQAPYSNVPALAERWQRILELAEGLRYSNLHNGLLLQQHIEHNTQALAVLNTRHGQSL 128
Query: 358 YGANGQTSTTHRGGKKISI 414
YG +G G+KI I
Sbjct: 129 YGPDGHAKGASLLGRKIGI 147
Score = 39.1 bits (87), Expect = 0.089
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Frame = +2
Query: 95 GRSTASQLQWITEQKSSLLATLDYLEQLR-RKEPNT------ANSVDISQRWQEI 238
GR LQ +TEQKSS+LATL YL+Q R E N +N +++RWQ I
Sbjct: 34 GRIQGIVLQGVTEQKSSILATLAYLDQTRLTTEKNINIQAPYSNVPALAERWQRI 88
>UniRef50_Q6D6I2 Cluster: Flagella synthesis protein; n=1;
Pectobacterium atrosepticum|Rep: Flagella synthesis
protein - Erwinia carotovora subsp. atroseptica
(Pectobacterium atrosepticum)
Length = 145
Score = 44.0 bits (99), Expect = 0.003
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Frame = +1
Query: 22 LDQMSAVLNDLKTVMDQEQQHLSMGQINGQPVAMDYRTKKLTAGDAGLPRTVTQERTQYS 201
LDQ+ + L +L V+ +EQ L G IN +A+ T++ T+ A + T+ S
Sbjct: 8 LDQLLSNLRELDAVLSEEQTLLCAGYINN--IALQQVTERKTSLLATMQHLETRRHESES 65
Query: 202 K*R*Y*-----STLAGNYCE----NAALRQMXQHNGWLLEGQIERNQQALEMLKPHQXPT 354
L+ + + L +HNG LL I +A+ +LKP
Sbjct: 66 ALTLQAPYDGIEPLSVYWQQVQELTRRLNNQNKHNGLLLSRHIAYTNEAINILKPRHGQG 125
Query: 355 LYGANGQTSTTHRGGKKIS 411
LYG +GQ+ GG+KI+
Sbjct: 126 LYGPDGQSKGVTVGGRKIT 144
>UniRef50_Q7N5N6 Cluster: Flagella synthesis protein FlgN; n=1;
Photorhabdus luminescens subsp. laumondii|Rep: Flagella
synthesis protein FlgN - Photorhabdus luminescens subsp.
laumondii
Length = 146
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 256 LRQMXQHNGWLLEGQIERNQQALEMLKPHQXPTLYGANGQTST-THRGGKKISI 414
+R + HNG LL ++ N +A+ LK H P+LYG++GQ + + G K+ +
Sbjct: 93 VRDLNTHNGSLLTQHLDLNSKAIAFLKSHHSPSLYGSDGQAARHSMLSGHKVQV 146
>UniRef50_Q1GZW9 Cluster: FlgN; n=1; Methylobacillus flagellatus
KT|Rep: FlgN - Methylobacillus flagellatus (strain KT /
ATCC 51484 / DSM 6875)
Length = 149
Score = 37.1 bits (82), Expect = 0.36
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 259 RQMXQHNGWLLEGQIERNQQALEML-KPHQXPTLYGANGQTST 384
+++ + NG L+ Q RNQQ L+ L +P YG NGQ ST
Sbjct: 98 KELNRVNGILISKQFRRNQQVLDTLGRPPSLEQFYGPNGQAST 140
>UniRef50_A7K920 Cluster: Putative uncharacterized protein z410R;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein z410R - Chlorella virus ATCV-1
Length = 129
Score = 34.7 bits (76), Expect = 1.9
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 633 W*CLACF*VCYISCRSGHWVPCPWRLRV*WRSCWRG 526
W L C+ ++ CR G W+ C W R W CWRG
Sbjct: 16 WTWLGCWYGFWLGCRRGFWLGC-W--RGFWLGCWRG 48
>UniRef50_UPI00006D92DC Cluster: COG0697: Permeases of the
drug/metabolite transporter (DMT) superfamily; n=1;
Pseudomonas aeruginosa 2192|Rep: COG0697: Permeases of
the drug/metabolite transporter (DMT) superfamily -
Pseudomonas aeruginosa 2192
Length = 89
Score = 34.3 bits (75), Expect = 2.5
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -3
Query: 595 MPEWSLGTMPLAFTRLMAVVLAGIAAYFAHWRXWASKLKNLPAGRCNNALR 443
+PE G MP L+AV LA +AAY A W + L++LP GR + L+
Sbjct: 10 LPEAWAGQMPER-AALLAVALA-VAAYAASLLCWLAALRHLPLGRAYSLLK 58
>UniRef50_A4HHR3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 1043
Score = 34.3 bits (75), Expect = 2.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 207 LFAVLGSFLRNCSR*SSVASSELFCSVIHCNWLAVDLPHREMLLLLIHY 61
L A L S+L+ S ++ FC ++ CN L V++ + +LLIHY
Sbjct: 694 LLATLQSYLQPGSEAKHTITASGFCKLLSCNRLPVEVVSHVITVLLIHY 742
>UniRef50_UPI0000498E47 Cluster: hypothetical protein 88.t00017;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 88.t00017 - Entamoeba histolytica HM-1:IMSS
Length = 473
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 397 RRDGLLRSDRSPHIASVPDAVST--FPAPVDCAQSVLPVTSRYVXSFGVVLRFHSNFLPA 224
+RD LL++ R PH S+PD ST FP V+C Q + V ++++ N +
Sbjct: 27 KRDQLLQTKREPH--SLPDVCSTNDFPIVVECLQKRMDVEENLRRLRFIIVKTKGNCIDT 84
Query: 223 LTNINAI 203
L + + +
Sbjct: 85 LIDYHGL 91
>UniRef50_A4FTT9 Cluster: Putative uncharacterized protein; n=1;
Monodon baculovirus|Rep: Putative uncharacterized
protein - Monodon baculovirus
Length = 397
Score = 33.9 bits (74), Expect = 3.4
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 77 SNISLWGRSTASQLQWITEQKSSLLATLDYL-EQLRRKEPNTANSVDISQRWQEITVKTQ 253
+NIS + S + ++ I K L+ TLD + +Q+ + N NSVD+++ ++EI
Sbjct: 78 ANISQYQLSLSDKMGNILGNKDDLVKTLDRIKDQILNELQNHDNSVDLNENFKEIIRMIF 137
Query: 254 HYAK*XN 274
YAK N
Sbjct: 138 TYAKNYN 144
>UniRef50_Q9UB28 Cluster: Myotactin form B; n=6; cellular
organisms|Rep: Myotactin form B - Caenorhabditis elegans
Length = 4450
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 457 YTVR-RANSLTLKPSXASERSTRQSPPARPPLN 552
Y VR RA + L P E ST Q PP+ PPLN
Sbjct: 1989 YEVRVRARTTELGPEETKEVSTEQQPPSSPPLN 2021
>UniRef50_Q6PLR5 Cluster: Progesterone receptor isoform A; n=1;
Taenia solium|Rep: Progesterone receptor isoform A -
Taenia solium (Pork tapeworm)
Length = 69
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -1
Query: 579 WVPCPWRLRV*WRSCWRGLPRTSLTGGTGLQS*RICPPDGVTM 451
+ PCP L V SCWRG T +T L + PPDG+T+
Sbjct: 3 YCPCPALLAVAPGSCWRGTAATDVTQAMFLYA----PPDGLTL 41
>UniRef50_Q1EQD4 Cluster: Putative uncharacterized protein; n=2;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces kanamyceticus
Length = 422
Score = 33.5 bits (73), Expect = 4.4
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = -3
Query: 640 AELVMSGVLLGMLHIMPEWSLGTMPLAFTRLMAVVLAGIAAYFAHWRXWASKLKNLPAGR 461
A +S +L G L E + T L F L+A +++ + YF HW A L +L A
Sbjct: 277 ASFFVSNLLTGRLTNAAEPRIRTERLLFIGLLAALVSVMGFYFTHWLPLALALTSLHA-- 334
Query: 460 CNNALRLQCRPEIIFR 413
++A+ C +I R
Sbjct: 335 ASHAVVAACAVSLIVR 350
>UniRef50_Q1D6S8 Cluster: Putative lipoprotein; n=1; Myxococcus
xanthus DK 1622|Rep: Putative lipoprotein - Myxococcus
xanthus (strain DK 1622)
Length = 369
Score = 33.5 bits (73), Expect = 4.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 481 LTLKPSXASERSTRQSPPARPPLNA*TPGAWYPM 582
L L + S ST + PPA PP A P AW P+
Sbjct: 14 LALSGACTSGSSTAEVPPAPPPARASAPSAWVPV 47
>UniRef50_UPI00015BAFCE Cluster: membrane-bound
dolichyl-phosphate-mannose-protein
mannosyltransferase-like protein; n=1; Ignicoccus
hospitalis KIN4/I|Rep: membrane-bound
dolichyl-phosphate-mannose-protein
mannosyltransferase-like protein - Ignicoccus hospitalis
KIN4/I
Length = 464
Score = 33.1 bits (72), Expect = 5.9
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = -3
Query: 640 AELVMSGVLLGM--LHIMPEWSLGTMPLA-FTRLMAVVLAGIAAYFAHW-------RXWA 491
A L + LLG+ +++ +L T +A FT + V AG+AA A W WA
Sbjct: 382 ASLYLVSALLGLSAVYLAGNKTLYTFYVAVFTPMADVAAAGLAALLADWDSAYEVVEWWA 441
Query: 490 SKLKNLPAGRCNNALRLQCRPE 425
+LK L A A RL+C+ E
Sbjct: 442 KRLKGLVAWSLGRA-RLECKLE 462
>UniRef50_A0Y689 Cluster: Putative cyanophycinase; n=1;
Alteromonadales bacterium TW-7|Rep: Putative
cyanophycinase - Alteromonadales bacterium TW-7
Length = 545
Score = 32.7 bits (71), Expect = 7.7
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 122 WITEQKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEI 238
W T S+ ATLD L+QL++ EP + ++ +W+++
Sbjct: 80 WPTSSLSNKDATLDVLKQLQKNEPKHVSKQNLLWQWRDV 118
>UniRef50_Q9HY59 Cluster: UPF0188 membrane protein PA3558; n=8;
Pseudomonas|Rep: UPF0188 membrane protein PA3558 -
Pseudomonas aeruginosa
Length = 137
Score = 32.7 bits (71), Expect = 7.7
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 640 AELVMSGVLLGMLHI-MPEWSLGTMPLAFTRLMAVVLAGIAAYFAHWRXWASKLKNLPAG 464
A G+ GM + +PE G P L+AV LA +AAY A W + L++LP G
Sbjct: 17 ASAAQLGMRWGMSRLPLPEAWAGQTPER-AALLAVALA-VAAYAASLLCWLAALRHLPLG 74
Query: 463 RCNNAL 446
R + L
Sbjct: 75 RAYSLL 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,720,083
Number of Sequences: 1657284
Number of extensions: 13999929
Number of successful extensions: 41415
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 39878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41379
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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