Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0097
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.6  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +1

Query: 37  FLEYSQLFILYHSSYRYVWKT*YHASTVFPERYDMSFFK 153
           F+  + +F+L+H+   +VW         + E+Y + FF+
Sbjct: 114 FVVTNIIFVLFHTYEAFVWTR--IMGVAYYEQYAVEFFQ 150



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 98  VFHTYR*LEWYRIKSCEYSRKNIID 24
           +FHTY    W RI    Y  +  ++
Sbjct: 123 LFHTYEAFVWTRIMGVAYYEQYAVE 147


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 107 MPPRCFPSAMTCPSSNEACGE 169
           MP RC  +  +CP+ + A  E
Sbjct: 345 MPHRCHGNLQSCPTRSHAVWE 365


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 572  IIPVWLKSLVCKTCCFNI 519
            IIP+    LVC TC  NI
Sbjct: 951  IIPILFFMLVCFTCKSNI 968


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 572  IIPVWLKSLVCKTCCFNI 519
            IIP+    LVC TC  NI
Sbjct: 951  IIPILFFMLVCFTCKSNI 968


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 572  IIPVWLKSLVCKTCCFNI 519
            IIP+    LVC TC  NI
Sbjct: 951  IIPILFFMLVCFTCKSNI 968


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 572  IIPVWLKSLVCKTCCFNI 519
            IIP+    LVC TC  NI
Sbjct: 951  IIPILFFMLVCFTCKSNI 968


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 637 VI*SLCYFNIGLHT 678
           ++ S+CYF IGL++
Sbjct: 508 ILTSVCYFMIGLNS 521


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,121
Number of Sequences: 336
Number of extensions: 4281
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)