Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0059
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    36   0.18 
AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens ...    30   6.7  
AK127220-1|BAC86887.1|  198|Homo sapiens protein ( Homo sapiens ...    30   8.8  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 299 YLFIYVYIYDMYIFMVSIYLYICIYL 222
           YL+IY YI+      + IY+YIC+Y+
Sbjct: 34  YLYIYFYIFTYIYLYIFIYIYICLYI 59



 Score = 33.5 bits (73), Expect = 0.72
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 299 YLFIYVYIYDMYIFMVSIYLYICIYL 222
           Y+++Y+Y+Y  +     IYLYI IY+
Sbjct: 28  YVYVYIYLYIYFYIFTYIYLYIFIYI 53



 Score = 32.7 bits (71), Expect = 1.3
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = -3

Query: 299 YLFIYVYIYDMYIFMVSIYLYICIYLST 216
           Y+FIY+YIY +Y++   IYLYI  Y+ T
Sbjct: 20  YIFIYIYIY-VYVY---IYLYIYFYIFT 43



 Score = 32.3 bits (70), Expect = 1.7
 Identities = 14/27 (51%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
 Frame = -3

Query: 299 YLFIYVYIYDMYIFM-VSIYLYICIYL 222
           Y+F Y+YIY ++IF+ + I++YICI L
Sbjct: 66  YIFTYIYIY-LHIFIYLHIFIYICICL 91



 Score = 31.9 bits (69), Expect = 2.2
 Identities = 13/27 (48%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
 Frame = -3

Query: 299 YLFIYVYIYDMYIFM-VSIYLYICIYL 222
           Y+F+Y++I+ +YIF+ + IY+Y+ IYL
Sbjct: 10  YMFMYIFIF-IYIFIYIYIYVYVYIYL 35



 Score = 31.9 bits (69), Expect = 2.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 299 YLFIYVYIYDMYIFMVSIYLYICIYL 222
           Y+F Y+Y+Y      + +Y+Y+ IYL
Sbjct: 40  YIFTYIYLYIFIYIYICLYIYLYIYL 65



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
 Frame = -3

Query: 296 LFIYVYIYDMYIFM-VSIYLYICIYL 222
           L+IY+YIY +YIF  + IYL+I IYL
Sbjct: 57  LYIYLYIY-LYIFTYIYIYLHIFIYL 81



 Score = 31.1 bits (67), Expect = 3.8
 Identities = 14/28 (50%), Positives = 23/28 (82%), Gaps = 2/28 (7%)
 Frame = -3

Query: 299 YLFIYVYIYD-MYIFM-VSIYLYICIYL 222
           YL+IY+YI+  +YI++ + IYL+I IY+
Sbjct: 60  YLYIYLYIFTYIYIYLHIFIYLHIFIYI 87



 Score = 30.7 bits (66), Expect = 5.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 299 YLFIYVYIYDMYIFMVSIYLYICIYL 222
           YL+I++YIY      + IYLYI  Y+
Sbjct: 46  YLYIFIYIYICLYIYLYIYLYIFTYI 71


>AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42815 fis, clone BRCAN2014143. ).
          Length = 189

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 299 YLFIYVYIYDMYIFMVSIYLYICIYL 222
           Y+ IY+++Y      + +Y YIC+Y+
Sbjct: 12  YICIYMHVYPCICIYLHVYTYICMYI 37


>AK127220-1|BAC86887.1|  198|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45287 fis, clone BRHIP3002124. ).
          Length = 198

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = -1

Query: 457 LVLTFYILH-SLFSLFFYGMRSHS 389
           LVL F++LH SLF+ FF+G  S S
Sbjct: 83  LVLQFHVLHLSLFTFFFFGTESPS 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,228,915
Number of Sequences: 237096
Number of extensions: 1601730
Number of successful extensions: 2888
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2866
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)