Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0058
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p pro...    98   1e-20
AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA p...    98   1e-20
AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-P...    48   1e-05

>AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p
           protein.
          Length = 95

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 42/74 (56%), Positives = 55/74 (74%)
 Frame = +2

Query: 47  KLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIXVEK 226
           K+CGPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+   HS+EDF     +
Sbjct: 2   KICGPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANR 59

Query: 227 GYTLNAQXC*LRHC 268
            Y  NA  C +  C
Sbjct: 60  AYNQNAYNCWIAAC 73


>AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA
           protein.
          Length = 95

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 42/74 (56%), Positives = 55/74 (74%)
 Frame = +2

Query: 47  KLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIXVEK 226
           K+CGPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+   HS+EDF     +
Sbjct: 2   KICGPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEEY--HSLEDFYAAANR 59

Query: 227 GYTLNAQXC*LRHC 268
            Y  NA  C +  C
Sbjct: 60  AYNQNAYNCWIAAC 73


>AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-PA
           protein.
          Length = 107

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = +2

Query: 53  CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKNPPHSIEDFVIXVEKGY 232
           CG K  L  L +S WG + L L+G+F+Y++++ LLE LP     P  S E F    ++ Y
Sbjct: 3   CGRKCCLFCLFMSAWGFLMLNLLGIFFYVQSLMLLESLPLPHHFP--SQEAFKEQADEAY 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,990,081
Number of Sequences: 53049
Number of extensions: 592941
Number of successful extensions: 1199
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)