Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0057
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.6  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 477 YFCLLPENYELTRV 436
           YFC LPE +   ++
Sbjct: 577 YFCKLPEKFRFVKI 590


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 278 YCTGFLTASSENGLNDMLFDRVSEAPLDEAV 370
           +CT  +    + G  D LFD  S A  D  +
Sbjct: 68  FCTALVIFYCQEGSVDFLFDNFSAAFQDHNI 98


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 278 YCTGFLTASSENGLNDMLFDRVSEAPLDEAV 370
           +CT  +    + G  D LFD  S A  D  +
Sbjct: 301 FCTALVIFYCQEGSVDFLFDNFSAAFQDHNI 331


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 278 YCTGFLTASSENGLNDMLFDRVSEAPLDEAV 370
           +CT  +    + G  D LFD  S A  D  +
Sbjct: 301 FCTALVIFYCQEGSVDFLFDNFSAAFQDHNI 331


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 336 IECRRHLSMKQSCGSYGRLRYN 401
           I+C+R  + KQ C +  R+ Y+
Sbjct: 786 IKCKRIYNEKQCCKNCARVDYS 807


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 513 RPQTVKYYYLFIYFCLLPENYELTRV 436
           +P  +  YY+  +  + PEN+  T +
Sbjct: 296 KPDLIPNYYIAHFINIDPENHNKTEI 321


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -1

Query: 504 TVKYYYLFI-YFCLLPENYELTRVTPQLLFIMIPY 403
           T  +YY FI   C+    Y     T  LLF++  Y
Sbjct: 100 TYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIY 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,696
Number of Sequences: 336
Number of extensions: 3495
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)