Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0057
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U52077-1|AAC52010.1|  343|Homo sapiens mariner transposase protein.    38   0.034
U80776-1|AAC52012.1|  671|Homo sapiens unknown protein.                35   0.24 
DQ341316-1|ABC72087.1|  344|Homo sapiens SETMAR protein.               35   0.24 
BC008931-1|AAH08931.2|  429|Homo sapiens SETMAR protein protein.       35   0.24 
AY952295-1|AAY29570.1|  671|Homo sapiens metnase protein.              35   0.24 
AK222734-1|BAD96454.1|  671|Homo sapiens SET domain and mariner ...    35   0.24 
AF054989-1|AAC09350.1|  671|Homo sapiens unknown protein.              35   0.24 
AY358233-1|AAQ88600.1|   88|Homo sapiens ISPF6484 protein.             31   5.2  

>U52077-1|AAC52010.1|  343|Homo sapiens mariner transposase protein.
          Length = 343

 Score = 37.9 bits (84), Expect = 0.034
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +1

Query: 553 YCVELRAMI*KLVEKQPQPMNRSSPLLLRDNVRSHRARETVLALHKL 693
           Y  ++  M  KL   QP  +NR  P+LL DN R H A+ T+  L++L
Sbjct: 218 YAQQIDEMHRKLQRLQPALVNRKGPILLHDNARPHVAQPTLQKLNEL 264


>U80776-1|AAC52012.1|  671|Homo sapiens unknown protein.
          Length = 671

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 553 YCVELRAMI*KLVEKQPQPMNRSSPLLLRDNVRSHRARETVLALHKL 693
           Y  E+  M  KL   Q   +NR  P+LL DN R H A+ T+  L++L
Sbjct: 546 YAQEIDEMNQKLQRLQLALVNRKGPILLHDNARPHVAQPTLQKLNEL 592


>DQ341316-1|ABC72087.1|  344|Homo sapiens SETMAR protein.
          Length = 344

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 553 YCVELRAMI*KLVEKQPQPMNRSSPLLLRDNVRSHRARETVLALHKL 693
           Y  E+  M  KL   Q   +NR  P+LL DN R H A+ T+  L++L
Sbjct: 219 YAQEIDEMNQKLQRLQLALVNRKGPILLHDNARPHVAQPTLQKLNEL 265


>BC008931-1|AAH08931.2|  429|Homo sapiens SETMAR protein protein.
          Length = 429

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 553 YCVELRAMI*KLVEKQPQPMNRSSPLLLRDNVRSHRARETVLALHKL 693
           Y  E+  M  KL   Q   +NR  P+LL DN R H A+ T+  L++L
Sbjct: 304 YAQEIDEMNQKLQRLQLALVNRKGPILLHDNARPHVAQPTLQKLNEL 350


>AY952295-1|AAY29570.1|  671|Homo sapiens metnase protein.
          Length = 671

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 553 YCVELRAMI*KLVEKQPQPMNRSSPLLLRDNVRSHRARETVLALHKL 693
           Y  E+  M  KL   Q   +NR  P+LL DN R H A+ T+  L++L
Sbjct: 546 YAQEIDEMNQKLQRLQLALVNRKGPILLHDNARPHVAQPTLQKLNEL 592


>AK222734-1|BAD96454.1|  671|Homo sapiens SET domain and mariner
           transposase fusion gene variant protein.
          Length = 671

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 553 YCVELRAMI*KLVEKQPQPMNRSSPLLLRDNVRSHRARETVLALHKL 693
           Y  E+  M  KL   Q   +NR  P+LL DN R H A+ T+  L++L
Sbjct: 546 YAQEIDEMNQKLQRLQLALVNRKGPILLHDNARPHVAQPTLQKLNEL 592


>AF054989-1|AAC09350.1|  671|Homo sapiens unknown protein.
          Length = 671

 Score = 35.1 bits (77), Expect = 0.24
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 553 YCVELRAMI*KLVEKQPQPMNRSSPLLLRDNVRSHRARETVLALHKL 693
           Y  E+  M  KL   Q   +NR  P+LL DN R H A+ T+  L++L
Sbjct: 546 YAQEIDEMNQKLQRLQLALVNRKGPILLHDNARPHVAQPTLQKLNEL 592


>AY358233-1|AAQ88600.1|   88|Homo sapiens ISPF6484 protein.
          Length = 88

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 189 GIYTHAHILCIRLKL*SSFDFSQSGKIKFCIVQVF*RLHLRMV*TICYLI 338
           G+YT  H+L  R    SS    +SG+ K   ++ + R  +R++ T  YL+
Sbjct: 18  GMYTRTHLLYARSFSRSSLQNGKSGEGKLMPIRCWERKQMRLIFTYLYLV 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,546,516
Number of Sequences: 237096
Number of extensions: 1768416
Number of successful extensions: 2060
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2060
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)