Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0054
         (573 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   4.0  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   9.3  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 47   SAINKAIHAGRKIFLTINADGS 112
            SA NK+ HAG  I  ++N  G+
Sbjct: 1235 SATNKSFHAGLSIAASVNPHGN 1256


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 249 HSSIVI*GNTYIWFVQTNATRLYESRVRCLTKSQCLEL 362
           HS +VI G+   W V+  + R  E     L+  Q L+L
Sbjct: 116 HSQVVIAGDFNAWHVEWGSERNSEKGEELLSAIQQLDL 153


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 254 INCYLRKYLH 283
           INC LR YLH
Sbjct: 214 INCLLRNYLH 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,104
Number of Sequences: 2352
Number of extensions: 12977
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)