Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0053
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    25   0.45 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.6  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 154 LTRTHSTRLRNGSTTFARSVVL 219
           LT TH  ++ N STTF    VL
Sbjct: 351 LTNTHKRKIENTSTTFNAHTVL 372


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 348  TMLNSYSEE*LLPCLAWTLP 407
            T   +Y E+  LPCLA  LP
Sbjct: 1315 TFTTTYKEDVTLPCLAVGLP 1334


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 521 ALVSSVAASNKHNCCPAPCC 462
           A+V S+  S K    P PCC
Sbjct: 318 AIVQSLVNSMKPKEVPGPCC 337



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 406 RKQTSRRHARGDLETIARRQQ 468
           ++Q+SRRH R +L+   RR+Q
Sbjct: 256 KRQSSRRH-RKNLKDPCRRRQ 275


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 124 RLWRLLFMISLTRTHSTRLRN 186
           R  +LL+ I +T+T S  +RN
Sbjct: 309 RTKKLLYRIPVTKTDSMLIRN 329


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 88  RSWPAVSHSWSR 53
           +SWP +   WSR
Sbjct: 283 KSWPQLIEKWSR 294


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 124 RLWRLLFMISLTRTHSTRLRN 186
           R  +LL+ I +T+T S  +RN
Sbjct: 134 RTKKLLYRIPVTKTDSMLIRN 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,463
Number of Sequences: 336
Number of extensions: 3515
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)