Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0053
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-25
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 105 3e-23
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 93 2e-19
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 91 1e-18
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 87 2e-17
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 85 4e-17
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 83 2e-16
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 83 2e-16
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 81 6e-16
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 81 8e-16
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 78 6e-15
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 75 6e-14
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 74 1e-13
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 73 3e-13
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 69 4e-12
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 65 6e-11
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 61 1e-09
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 60 2e-09
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 60 2e-09
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 60 2e-09
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 59 3e-09
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 59 3e-09
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 52 3e-07
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 51 8e-07
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 50 2e-06
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 49 4e-06
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 46 2e-05
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 44 1e-04
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 44 2e-04
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 43 2e-04
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 42 4e-04
SB_39298| Best HMM Match : Ras (HMM E-Value=0.11) 42 4e-04
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 42 5e-04
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 41 0.001
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 40 0.001
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 40 0.001
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 40 0.002
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 39 0.003
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 38 0.010
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 37 0.014
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 37 0.018
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 37 0.018
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 36 0.024
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 36 0.024
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 36 0.041
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 35 0.055
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 35 0.055
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 35 0.072
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 34 0.096
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 33 0.17
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 33 0.22
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 33 0.22
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.22
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 31 0.67
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 31 1.2
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 1.2
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 31 1.2
SB_36289| Best HMM Match : RNA_pol_N (HMM E-Value=1.9) 31 1.2
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 30 1.6
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 30 1.6
SB_47223| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_50642| Best HMM Match : Spectrin (HMM E-Value=1) 29 3.6
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 29 3.6
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 28 6.3
SB_49920| Best HMM Match : MANEC (HMM E-Value=0.73) 28 8.3
SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 28 8.3
SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 113 bits (271), Expect = 2e-25
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGIDF++KT+ L+D VRLQ+WDTAGQERFR LI SYIRDS A++V+DITN SF
Sbjct: 196 IGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVG 255
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ VR ERG +I++VGNK D
Sbjct: 256 DWVKMVRDERGEKAVIIIVGNKMD 279
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
VG + D SD+R+VS + +K A+ L + ++ETSAK+GYNVK LF +++ L
Sbjct: 274 VGNKMDE-SDRRKVSYDVAEKSAERLGLSYVETSAKSGYNVKLLFTKLSKDL 324
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 105 bits (252), Expect = 3e-23
Identities = 55/82 (67%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAEN 412
VG + D SDKRQV+ EEG++KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGM+S
Sbjct: 37 VGNKTD-LSDKRQVTAEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTTE 95
Query: 413 KP-PEDMHEVILRQSPGDNKEQ 475
K ED+ EV L+ +P + +Q
Sbjct: 96 KTNKEDLIEVKLKDTPQEPPQQ 117
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 162 NSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
NSF QTSKWIDDVRTERG+DVIIMLVGNKTD
Sbjct: 12 NSFQQTSKWIDDVRTERGNDVIIMLVGNKTD 42
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF KT+ ++ V+LQ+WDTAGQERFRS+ SY ++ +V YDITN SF
Sbjct: 40 IGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLP 99
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+DD DV+I +VGNK+D
Sbjct: 100 QWLDDTNRYTSKDVLIAIVGNKSD 123
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 93.1 bits (221), Expect = 2e-19
Identities = 38/84 (45%), Positives = 59/84 (70%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG FL++T+ L+D TV+ ++WDTAGQER+ SL P Y R + A+VVYDITN ++F +
Sbjct: 54 IGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK 113
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ +++ + +++I L GNK D
Sbjct: 114 TWVKELQRQASPNIVIALSGNKAD 137
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 236 GRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
G + D + KR V E+ A++ ++F+ETSAK NV +F
Sbjct: 133 GNKAD-LASKRMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIF 175
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 90.6 bits (215), Expect = 1e-18
Identities = 39/84 (46%), Positives = 61/84 (72%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG++F SK + + ++V+LQ+WDTAGQERFRS+ SY R + A++VYDI++ +F+ +
Sbjct: 128 IGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLT 187
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ D RT +++I+LVGNK D
Sbjct: 188 NWLTDARTLASPNIVIILVGNKKD 211
Score = 35.9 bits (79), Expect = 0.031
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVA-AALPGMDSAE 409
VG ++D +D R+V+ E + A+E +MF+ETSA G NV++ F + + L ++S E
Sbjct: 206 VGNKKDLDAD-REVTFLEASRFAQENELMFLETSALTGENVEEGFLKCSRTILNKIESGE 264
Query: 410 NKP 418
P
Sbjct: 265 LDP 267
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 87.4 bits (207), Expect = 1e-17
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R + +VVYD+T+ SF+
Sbjct: 62 IGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVK 121
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ ++ +V +LVGNK D
Sbjct: 122 QWLQEIDRYACENVNKLLVGNKCD 145
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
VG + D + K+ V + A+ L V F+ETSAK NV+Q F +AA +
Sbjct: 140 VGNKCD-LTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEI 190
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 86.6 bits (205), Expect = 2e-17
Identities = 33/84 (39%), Positives = 58/84 (69%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG++F ++++ +E + ++ Q+WDTAGQER+R++ +Y R + AV+VYD+T +F
Sbjct: 45 IGVEFATRSIQVEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVE 104
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ +VR +++MLVGNK D
Sbjct: 105 RWLLEVREHADPTIVVMLVGNKCD 128
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/84 (44%), Positives = 59/84 (70%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF +T+ ++ V+LQ+WDTAGQERFR++ +Y R + +VVYD+T+A++F
Sbjct: 10 IGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVK 69
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ ++ + DVI +LVGNK D
Sbjct: 70 RWLHEI-DQNCDDVIRILVGNKDD 92
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF KT+ +E +L +WDTAGQERFR+L PSY R + ++VYD + +F +
Sbjct: 41 IGVDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLE 100
Query: 183 KWIDDVRT-ERGSDVIIMLVGNKTD 254
+W+++V D++ MLVGNK D
Sbjct: 101 EWLNEVEMYSTKKDIVKMLVGNKID 125
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+G+DF KT+ ++ +T LQLWDTAGQERFRS+ SY R + +++YD+T SF
Sbjct: 475 LGVDFQMKTLVVDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVR 534
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W++ + V IML GNK D
Sbjct: 535 DWVEAIEESCSKPVPIMLCGNKID 558
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 239 RQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKP 418
RQ +K ++ E G + AKE +FIETS+K N+ + +A L ++ E K
Sbjct: 560 RQSAAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELARMLRDVEDIEVKQ 619
Query: 419 PEDM 430
M
Sbjct: 620 NNGM 623
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/84 (41%), Positives = 57/84 (67%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF +T+ ++ +T++LQ+WDTAGQERFR+L +Y R + V++YD+ + +F S
Sbjct: 41 IGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLS 100
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+++V V +LVGNK D
Sbjct: 101 QWLEEVSEYACEGVNTILVGNKCD 124
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
VG + D D RQV + A++L++ FIETSAK NV+ +FR +AA L
Sbjct: 119 VGNKCDLI-DCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAEL 169
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 81.4 bits (192), Expect = 6e-16
Identities = 33/75 (44%), Positives = 49/75 (65%)
Frame = +3
Query: 30 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE 209
M + D+ + +WDTAGQERF+SL P Y RD+ A++VYDIT ++FH WI +++
Sbjct: 2 MIVNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRY 61
Query: 210 RGSDVIIMLVGNKTD 254
D++I + GNK D
Sbjct: 62 GPQDIVIAVAGNKCD 76
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 236 GRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRV 376
G + D+ +D+R V ++ A ++ +F ETSA NV LF +
Sbjct: 72 GNKCDK-ADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEEL 117
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 81.0 bits (191), Expect = 8e-16
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF KTM + + + +QLWDTAGQERFRS+ Y R + ++ YD+T +SF
Sbjct: 929 IGVDFQIKTMNVNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLK 988
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
KW+ V V M++GNKTD
Sbjct: 989 KWMVSVEEGAEEGVAKMVLGNKTD 1012
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 78.6 bits (185), Expect = 4e-15
Identities = 32/84 (38%), Positives = 55/84 (65%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+G+D ++ + + V+LQ WDTAGQE+FR + SY R++ ++V+DITN +F
Sbjct: 44 VGVDVGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIP 103
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ +V+ +++ +LVGNKTD
Sbjct: 104 QWLMNVQKYTNKNILKVLVGNKTD 127
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAEN 412
VG + D R+V+T A+ ++++ETSAK NV+ L +A L ++A+N
Sbjct: 122 VGNKTDLKGASRKVNTRSAANLAEFEELLYLETSAKWDDNVEVLIAELAEQL--RENAKN 179
Query: 413 KPPED 427
+ E+
Sbjct: 180 RVFEE 184
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 78.2 bits (184), Expect = 6e-15
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 IGIDFLSKTMYLE-DRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 179
+G+DF + + L+ D ++LQ+WDTAGQERFRS+ SY R++ +++YDITN +SF
Sbjct: 46 VGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNV 105
Query: 180 SKWIDDVR-TERGSDVIIMLVGNKTD 254
W + + ++V+ MLVG+K D
Sbjct: 106 MDWYKEAKQCVEEAEVVFMLVGHKID 131
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/60 (46%), Positives = 37/60 (61%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAEN 412
VG + D+ S KR VSTEEG+ A+ N+MFIETSAK N+++ F VA + EN
Sbjct: 126 VGHKIDKES-KRVVSTEEGECFAEAHNMMFIETSAKVLCNIEEAFISVAEEVTNAWKEEN 184
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFR-SLIPSYIRDSTVAVVVYDITNANSFHQT 179
IG+DF K++ L V+LQLWDTAGQERFR S++ Y R+ V +YDIT SF
Sbjct: 79 IGVDFWEKSLELNGEFVKLQLWDTAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEAL 138
Query: 180 SKWIDDVRTERGS-DVIIMLVGNKTD 254
+ WI + R S DV +L+GNK D
Sbjct: 139 TTWIVEYRHHAYSGDVPKILIGNKCD 164
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 74.9 bits (176), Expect = 6e-14
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = +3
Query: 45 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDV 224
+ ++LQ+WDTAGQERF ++ +Y R + ++VYD+TN SF SKW+ + DV
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDV 62
Query: 225 IIMLVGNKTD 254
MLVGNK D
Sbjct: 63 KRMLVGNKCD 72
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
VG + D + DKR +S +G++ A + FIETSA + NV++ F
Sbjct: 67 VGNKCDMY-DKRVISQTKGEQLASSYGISFIETSALSNINVEKSF 110
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ-T 179
IG+DF L+ + V+LQLWDTAG+E++R+L S+ R + A++V+D++ SF
Sbjct: 43 IGVDFFIHDFDLDGKKVKLQLWDTAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSIR 102
Query: 180 SKWIDDVRTERGSDVIIMLVGNKTD 254
W+ + GSD I +LVGNK D
Sbjct: 103 DYWLHEFHKVSGSDTITILVGNKCD 127
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
VG + D+ DK+ VS E+ + N+ ++ETSAK NV + F +A L
Sbjct: 122 VGNKCDK-KDKK-VSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAMARKL 171
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVII 230
V+LQ+WDTAGQERFR++ SY R ++ YDIT ++F +W +DV+ + I
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIK 154
Query: 231 MLVGNKTD 254
+LVGNK D
Sbjct: 155 LLVGNKKD 162
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVM-FIETSAKAGYNVKQLFRRVAAAL 388
VG ++D +R+VS E+ A ++ +ETSAK N++ F R+A L
Sbjct: 157 VGNKKD-LEREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLAREL 208
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 68.9 bits (161), Expect = 4e-12
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSF 170
+GIDF KT++ D+ V+LQ+WDTAGQER+R++ +Y R + +++YDITN SF
Sbjct: 54 VGIDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF 109
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG++FL+K + L+ + LQ+WDTAGQERF+SL + R S + ++VY + +A SF S
Sbjct: 244 IGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLS 303
Query: 183 KW------IDDVRTERGSDVIIMLVGNKTD 254
W DVR + + +L+GNK D
Sbjct: 304 MWKKEFLYYADVRDQ--DNFPFILLGNKVD 331
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 64.9 bits (151), Expect = 6e-11
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Frame = +3
Query: 39 EDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGS 218
+++ ++L + DTAGQER+ S++P+Y R +V+DIT +F Q +WID RT G+
Sbjct: 397 DNKKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGA 456
Query: 219 D--VIIMLVGNKTD 254
D + ++LVGNK D
Sbjct: 457 DSNIQLILVGNKKD 470
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGID SK + + ++ V L +WDTAG ERFR++ +Y R + ++++++ + S
Sbjct: 44 IGIDSCSKFVKIGEKQVTLSVWDTAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLL 103
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
WI D E D + +LV NK D
Sbjct: 104 HWIHDT-DEFCPDALKVLVANKID 126
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 IGIDFLSKTM-YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 179
IG+DF KT+ + ++ T+RLQ+W AGQERF S+ Y + + VV++D+ +
Sbjct: 51 IGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGA 110
Query: 180 SKWIDDV----RTERGSDVIIMLVGNKTD 254
KW D+ + V +LVGNK+D
Sbjct: 111 IKWKKDLDSKYKLHSRKPVPCILVGNKSD 139
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +3
Query: 66 WDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGN 245
W+ AGQERFR++ SY R + ++VYDIT S++ KW+ +V T V ++LVGN
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGN 432
Query: 246 KTD 254
K D
Sbjct: 433 KID 435
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
VG + D +D R+V + + A ++ F+ETSAK NVK+ F
Sbjct: 430 VGNKIDLDTD-REVQPDAAQEWAALHDMPFVETSAKGAKNVKEAF 473
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +3
Query: 81 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
QER+R++ +Y R + AV+VYDI SF +KW++++R D+ I+L+GNK+D
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSD 59
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = +3
Query: 81 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
QER+R++ +Y R + AV+VYDI SF +KW++++R D+ I+L+GNK+D
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSD 59
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRT 206
+ LQLWDTAGQERFRSL ++ RD+ ++V+D+T+ SF W+ ++T
Sbjct: 166 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQT 217
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERF-----RSLIPSYIRDSTVAVVVYDITNANSFHQ 176
DF + + L +TV L + DT G+ R S +P R + AV+V+D+T+ SF +
Sbjct: 5 DFFER-LELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFER 63
Query: 177 TSKWIDDVRTERGSDVIIMLVGNKTD 254
W+D V+ G ++ ++LVGNKTD
Sbjct: 64 VPTWLDKVQEHCGHEIPVVLVGNKTD 89
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +3
Query: 63 LWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG----SDVII 230
+WDTAGQERF+SL ++ R + V+V+D+T NSF W D+ + +
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 231 MLVGNKTD 254
+++GNK D
Sbjct: 61 VVLGNKID 68
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/82 (28%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D K +++R L + DTAGQE F ++ Y+R ++V+ +T+ +SF + +K+
Sbjct: 46 DSYRKQCVIDERVAHLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFY 105
Query: 192 DDV-RTERGSDVIIMLVGNKTD 254
+ + R + ++ +++ GNK+D
Sbjct: 106 NQILRVKDRTEFPMIICGNKSD 127
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+G++ + ++ +WDTAGQE+F L Y A++++D+T+ ++
Sbjct: 65 LGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVP 124
Query: 183 KWIDDVRTERGSDVI-IMLVGNKTD 254
W D+ ER + I I+L GNK D
Sbjct: 125 NWHRDL--ERVCENIPIVLCGNKVD 147
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
DF K + +++ L++ DTAG E+F S+ YI++ ++VY + N +F
Sbjct: 38 DFYRKEIEVDNNPSILEILDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMR 97
Query: 192 DDVRTERGSD-VIIMLVGNKTD 254
+ +GS+ V I+LVGNK+D
Sbjct: 98 AQILRVKGSENVPIVLVGNKSD 119
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKWIDDVRTER 212
++ + V L LWDTAGQE + L P D+ V ++ + I + +S KW +V+
Sbjct: 5972 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HF 6030
Query: 213 GSDVIIMLVGNKTD 254
+V I+LVGNK D
Sbjct: 6031 CPNVPIILVGNKKD 6044
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +3
Query: 111 YIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
Y R + A++VYDI ++ +W+ ++R S+++IMLVGNK+D
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 49
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKW 188
D S + L+ + + LWDTAGQE + L P + V +V +DI + SF SKW
Sbjct: 40 DNYSSNIMLDGKAYNVGLWDTAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKW 99
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+ ++ + +LVGNK D
Sbjct: 100 LPEL-NHHMPETPKILVGNKRD 120
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Frame = +3
Query: 3 IGIDFL------SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNAN 164
IG+DF +T +D TV+LQ WD A ERF + Y R+ + A+V + + +
Sbjct: 86 IGVDFYVHFIEWRETDKKKDSTVKLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPS 145
Query: 165 SFHQTSKWIDDVRTERGSDVIIMLV 239
KW + V+ V ++LV
Sbjct: 146 RLSSALKWSEKVKEANSGSVPMVLV 170
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 260 DKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL--PGMDSAENKPPEDMH 433
D+R VS E G++ A+E + F+ETSAK N++Q F+ +A + ++ +P ++H
Sbjct: 171 DRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEPSNNIH 230
Query: 434 EVI 442
+I
Sbjct: 231 GII 233
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 135 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
++VYDIT +F SKW+ ++ DV M++GNK D
Sbjct: 129 MLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCD 168
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 54 RLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTERGSDVII 230
+ + DTAGQE + ++ Y+R + V+ + N+ SF +++ + + R + +V +
Sbjct: 278 KTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPM 337
Query: 231 MLVGNKTD 254
+LVGNK D
Sbjct: 338 VLVGNKCD 345
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 263 KRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
+R VST + + AK N+ F ETSAK V F
Sbjct: 348 QRTVSTSDAQELAKSYNIPFQETSAKTRQGVDDAF 382
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKWIDDVRTERGSDVIIM 233
L LWDT G + L P + S + ++ +DI+N +F + SKW+ + T+ I +
Sbjct: 54 LDLWDTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPET-TQVLPGSIRV 112
Query: 234 LVGNKTD 254
L+GNK D
Sbjct: 113 LIGNKND 119
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 27 TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSF-HQTSKWIDDVR 203
T+ + + ++ DTAGQE F +L P + V +V + + + SF + SKWI ++R
Sbjct: 58 TVEVNKKLCMIEFCDTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIR 117
Query: 204 TERGSDVIIMLVGNKTD 254
E I+LVG +D
Sbjct: 118 -EFQPKAPIILVGTHSD 133
>SB_39298| Best HMM Match : Ras (HMM E-Value=0.11)
Length = 64
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 96 SLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSD-VIIMLVGNKTD 254
SL S IR + +VVY IT+ NSF+ + ++ V +G+D V + LVGNKTD
Sbjct: 4 SLYESSIRWADAFIVVYSITDKNSFNTAVQLVEAVYYGKGTDEVHVALVGNKTD 57
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +3
Query: 42 DRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSD 221
++ +++ LWDT G E + SL ++ +S V +VVY + +S Q + + +
Sbjct: 55 NKKLKIHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAA 114
Query: 222 VIIMLVGNKTD 254
I+ LV NK D
Sbjct: 115 KIV-LVANKMD 124
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 YIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTERGSDVIIMLVGNKTD 254
Y+R+ +++Y IT+ +SF+ +++ D + R R D+ I+LVGNK D
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDD 53
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
VG + D KR+V+T+EG + A + F ETSA + V F
Sbjct: 48 VGNKDD-LEGKREVTTQEGQELAHRFDCPFFETSACQRHFVDDAF 91
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 120 DSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
D ++VYDITN SF + WI ++ DV M++GNK D
Sbjct: 84 DDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCD 128
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 DRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSD 221
D T+ + TAG E+F S+ YI++ ++VY + N +F + +GS+
Sbjct: 33 DPTIE-DFYHTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSE 91
Query: 222 -VIIMLVGNKTD 254
V I+LVGNK+D
Sbjct: 92 NVPIVLVGNKSD 103
Score = 34.3 bits (75), Expect = 0.096
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL--PGMDSA 406
VG + D + D+R+VS E A+ F ETSAK NV ++F V + G S
Sbjct: 98 VGNKSDIY-DEREVSVGEAKDLAEAWGCPFYETSAKTRSNVDKVFAEVVRRMKTTGTGSG 156
Query: 407 ENK 415
NK
Sbjct: 157 RNK 159
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 57 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIML 236
+ LWDT G E + SL ++ +S V +VVY + +S Q + + + I+ L
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAKIV-L 59
Query: 237 VGNKTD 254
V NK D
Sbjct: 60 VANKMD 65
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYL-EDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 188
D K++ L +D L++ DTAG F ++ I+++ V+VY + S + +
Sbjct: 142 DLYEKSVTLSKDFNAFLEIMDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALEL 201
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
++ +G V ++LVGNKTD
Sbjct: 202 QREIVYIKGKTVPMVLVGNKTD 223
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 135 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
++VYDIT +SF S+W+ ++ +V +L+GNK D
Sbjct: 6 LLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLD 45
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 111 YIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGS-----DVIIMLVGNKTD 254
+ +D+ A++VYD+T+ SF W+D+++ + GS V+ ++ NK D
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD 62
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 69 DTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 248
DTAG+E++ L Y R ++ A+V YDIT +S + + + ++++VG K
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCK 337
Query: 249 TD 254
D
Sbjct: 338 KD 339
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D + T+ + L L+DTAGQE + L P + V +V + + + +SF KW
Sbjct: 38 DNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+ ++ T +LVG + D
Sbjct: 98 VPEI-THHCPKTPFLLVGTQVD 118
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRV 376
VG + D ++R VS + G + A +L + F ETSAK NVK++F R+
Sbjct: 18 VGNKCD-MEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFERL 64
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKWID 194
LS + ++ + L LWDT+G E + + P + + ++ +DI+ + KWI
Sbjct: 269 LSTAVEVDGERIELTLWDTSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWII 328
Query: 195 DVRTERGSDVIIMLVGNKTD 254
+V + + ++LVG K D
Sbjct: 329 EV-CDLCPNKPVLLVGCKQD 347
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 36.7 bits (81), Expect = 0.018
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 24 KTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSF---HQTSKWID 194
K + + D ++ L + DTAG SYI + VVVY IT+ S+ Q K +
Sbjct: 6 KELRIGDSSMELDILDTAGNGE-----ASYIHNGDGFVVVYSITDYYSYEMARQLVKLVT 60
Query: 195 DVR-TERGSDVIIMLVGNKTD 254
VR T+ + I+LVGNK D
Sbjct: 61 QVRKTDDICQIPIVLVGNKRD 81
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = +3
Query: 66 WDTAGQER-----FRSLIPSYIRDSTVAVVVYDITNANSFHQTSK-WIDDVRTERGSDVI 227
WDT R L P RD+ V ++ +DITN SF S W+ +++ +
Sbjct: 69 WDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELK-HYMPETP 127
Query: 228 IMLVGNKTD 254
+++VGNK D
Sbjct: 128 VLVVGNKKD 136
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKEL-NVMFIETSAKAGYNVKQLF 367
VG + D D+R V ++G AK+ N F+ETSAKA NV ++F
Sbjct: 4 VGNKCD-LEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIF 48
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD-VRTERGSDVI 227
V +++WD GQ RFRS+ Y R V + D + + + + + + + + +
Sbjct: 65 VTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIP 124
Query: 228 IMLVGNKTD 254
I+++GNK D
Sbjct: 125 ILVLGNKKD 133
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/74 (18%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD-VRTER 212
+E + + +WD GQ++ R L Y +++ + V D + +++ + ++ ++ +
Sbjct: 56 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDE 115
Query: 213 GSDVIIMLVGNKTD 254
D +++++ NK D
Sbjct: 116 LKDAVVLVMANKQD 129
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 35.1 bits (77), Expect = 0.055
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +3
Query: 111 YIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGS 218
+ +D+ A++VYD+T+ SF W+D+++ + GS
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGS 40
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 135 VVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
++VYDIT SF W++ +R + I+LVGNK D
Sbjct: 60 LLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCD 99
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 34.7 bits (76), Expect = 0.072
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVI 227
+R ++WD G+E+ R L +Y R + + V D T+A + + + + + + +
Sbjct: 66 IRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAP 125
Query: 228 IMLVGNKTD 254
I++ NK D
Sbjct: 126 ILIFANKQD 134
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 263 KRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
+R+VS EG AKEL + F ETSA+ NV F + ++
Sbjct: 23 EREVSVAEGRGLAKELGLPFFETSAEKNINVTDCFEALVDSI 64
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 34.3 bits (75), Expect = 0.096
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIR 119
+RL LWDTAGQE F ++ +Y R
Sbjct: 34 IRLMLWDTAGQEEFDAITKAYYR 56
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +3
Query: 111 YIRDSTVAVVVYDITNANSFHQTSKWIDD----VRTERGSDVIIMLVGNKTD 254
Y +++ A +V+D+T A++F KW +D ++ G + +L+ NK D
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCD 761
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +3
Query: 33 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWID---DVR 203
+ + L L DT+G E +R L Y+++ V + + + +S KW + DV
Sbjct: 57 FTASNSCHLYLLDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVF 116
Query: 204 TERGSDVIIMLVGNKTD 254
S V+ ++G K D
Sbjct: 117 LGDSSRVLKFVLGCKID 133
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 45 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV 200
+T L+ WD G + + ++V+D+TN SF KW+ +V
Sbjct: 58 KTFFLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTERGSD 221
+ V L +WD GQ++ R L Y + + + V D ++ + + + V ++ D
Sbjct: 62 KNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRD 121
Query: 222 VIIMLVGNKTD 254
V +++V NK D
Sbjct: 122 VPVVVVANKQD 132
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
DF K ++ + T LQ+ DT+G F ++ I V+VY + SF + +++
Sbjct: 63 DFFIKHVFFNNETYELQIIDTSGTYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYR 122
Query: 192 DDVRTERGSDVIIMLVGNKTD 254
++ + ++V NK D
Sbjct: 123 SEILEGGKNRHPCIVVCNKND 143
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VAVVVYDITNANSFHQTSKWIDDVRTERGSDVII--MLVGNKTD 254
+ +V YD++N SF+ +KW++ R+ SD + L+ KTD
Sbjct: 64 LVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTD 107
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTA 77
IG++ + + +E +TVR Q+WDTA
Sbjct: 51 IGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-R 212
+E + + +WD GQ++ R L Y +++ + V D + + + ++ + E
Sbjct: 56 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDE 115
Query: 213 GSDVIIMLVGNKTD 254
D ++++ NK D
Sbjct: 116 LRDAVLLVFANKQD 129
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 105 PSYIRDSTVAVVVYDITNANSFH---QTSKWIDDVRTERGSDVIIMLVGNKTD 254
P Y+ + +VVY I +F Q K I +++ ++ +I+L GNK D
Sbjct: 188 PVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCD 240
>SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +1
Query: 403 CRKQTSRRHARGDLETIARRQQGAGQQLCLLDAATELTSAHRPATV 540
CR+ T+R ++ D+ RQ+ AG++L ++ A T+ +A PA++
Sbjct: 620 CRRTTARAKSKLDVLASRVRQEWAGRKLKVIKAWTDQRTAQDPASL 665
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -1
Query: 299 PSCRLPRSRPASCPRIGLVADQHDDDVRTTLRANVVDPFRSL--VE*VRVSDIINNNRHS 126
P R +RP++ +G VA V ++L +NV+D +L +E V + ++ S
Sbjct: 842 PRSRKKDTRPSTSKTLGAVAMAAASGVTSSLVSNVIDELLTLPNLEGVMLPGVVGQEESS 901
Query: 125 RISYV*RYEGPE 90
++ R+ GP+
Sbjct: 902 EGHHLSRFVGPD 913
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 30.7 bits (66), Expect = 1.2
Identities = 8/24 (33%), Positives = 20/24 (83%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDT 74
IG++F ++++ ++ +T++ Q+WDT
Sbjct: 44 IGVEFATRSIQVDGKTIKAQIWDT 67
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 48 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDIT-NANSFHQTSKWIDDVRTERG-SD 221
T+ L WD AGQ + + ++ ST+ + V++ T W+ +++ SD
Sbjct: 726 TITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKARAPYSD 785
Query: 222 VIIM 233
VII+
Sbjct: 786 VIII 789
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 236 GRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
G+ Q +R +S++EG K A+ ++ + ETS+ G V ++F
Sbjct: 34 GQTQIDLISRRVISSKEGQKWARAQDLKYYETSSANGQGVYEMF 77
>SB_36289| Best HMM Match : RNA_pol_N (HMM E-Value=1.9)
Length = 857
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -1
Query: 299 PSCRLPRSRPASCPRIGLVADQHDDDVRTTLRANVVDPFRSL--VE*VRVSDIINNNRHS 126
P R +RP++ +G VA V ++L +NV+D +L +E V + ++ S
Sbjct: 576 PRSRKKDTRPSTSKTLGAVAMAAASGVTSSLVSNVIDELLTLPNLEGVMLPGVVGQEESS 635
Query: 125 RISYV*RYEGPE 90
++ R+ GP+
Sbjct: 636 EGHHLSRFVGPD 647
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/74 (18%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD-VRTER 212
+E + ++ +WD GQ++ R L Y +++ + V D + + + + + ++ E
Sbjct: 129 VEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEE 188
Query: 213 GSDVIIMLVGNKTD 254
++++ NK D
Sbjct: 189 LKRAALLVLANKQD 202
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG-SD 221
+ + +WD GQ++ R+L Y + + V D + + + + E
Sbjct: 38 KNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQ 97
Query: 222 VIIMLVGNKTD 254
VI++++ NK D
Sbjct: 98 VILLVIANKQD 108
>SB_47223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 337 GACLYEHHVQFLGLLVAFLGRDLPLVRESVLLPTNMMMTSEPRSVRTSSI 188
G + V V +GRD ++ ESV LP + E RSVR SS+
Sbjct: 214 GTTFFYEQVNLHKTFVISIGRD-SIINESVNLPRRLRNCWEGRSVRASSL 262
>SB_50642| Best HMM Match : Spectrin (HMM E-Value=1)
Length = 739
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 263 KRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMH 433
+ ++S ++ + +++E ++ E S +G + AALPG +S E PPE +H
Sbjct: 588 ENEISGKQNNSESEEK--VYTENSKSSGLSHAMSKTDDIAALPGEESKEELPPELIH 642
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 311 NVMFIETSAKAGYNVKQLFRRVAAALPGM 397
NV F+ETSAK G NV F +A PG+
Sbjct: 151 NVAFMETSAKTGLNVDLAFMAIARR-PGI 178
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/72 (19%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-R 212
+E + + +WD GQ++ R L Y +++ + V D + + + + + E
Sbjct: 505 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDE 564
Query: 213 GSDVIIMLVGNK 248
D ++++ NK
Sbjct: 565 LRDAVLLVFANK 576
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 552 TLNTQTIYTYINVSFDGCISPVRWSTSKLSKSDIQER 662
++NTQ +Y Y+N DG +SP TS + D ++R
Sbjct: 531 SVNTQELYNYLN---DGALSPCICDTSYMLLIDTRDR 564
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 272 VSTEEGDKKAKELNVMFIETSAKAGYNVKQL 364
VS EEG + A+ + +IE SA NVK++
Sbjct: 138 VSYEEGKEAAQNFKMQYIENSALLNENVKEV 168
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTERGSD 221
+ + +WD GQ++ R L Y + + + V D + + + + V + +
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNG 211
Query: 222 VIIMLVGNKTD 254
V +++V NK D
Sbjct: 212 VPVVVVANKQD 222
>SB_49920| Best HMM Match : MANEC (HMM E-Value=0.73)
Length = 139
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -1
Query: 482 CCPAPCCRRAIVSRSPRACLREVCFRQSPCQ 390
CC C A++S R C CF + CQ
Sbjct: 91 CCDVLHCDLAMMSYGGRTCYGVACFNEKLCQ 121
>SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 577
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 479 CPAPCCRRAIVSRSPRACLREVCFRQSPCQAGQQLLFGITV*HCNQLWRLSL 324
CPAP C A+++ +C + C R C+ + + HC QLW +L
Sbjct: 166 CPAPDCGYAVIATGCASCPKLQCERPG-CKT--EFCY-----HCKQLWHPNL 209
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 57 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ 176
+++ DTAGQE + S S + +V++ I +A+S+++
Sbjct: 2635 IEVVDTAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNE 2674
>SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 311 NVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMHEVILRQSP 457
N+ F T K +QLF R+ G+++ N+ +DM+E I +SP
Sbjct: 346 NIGFATTGVKTSTRSQQLFVRL-----GVNTKSNETHDDMYEEIPERSP 389
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,439,232
Number of Sequences: 59808
Number of extensions: 468835
Number of successful extensions: 1333
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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