Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0053
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 175 2e-44
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 167 5e-42
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 94 7e-20
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 92 3e-19
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 92 4e-19
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 91 9e-19
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 91 9e-19
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 90 1e-18
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 89 4e-18
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 87 9e-18
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 87 1e-17
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 87 1e-17
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 87 1e-17
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 87 1e-17
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 87 1e-17
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 87 1e-17
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 87 1e-17
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 87 1e-17
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 87 1e-17
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 87 1e-17
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 86 3e-17
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 85 6e-17
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 84 1e-16
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 83 1e-16
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 83 1e-16
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 83 2e-16
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 83 2e-16
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 82 3e-16
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 82 4e-16
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 79 2e-15
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 78 7e-15
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 75 6e-14
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 65 5e-11
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 65 5e-11
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 61 8e-10
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 57 1e-08
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 56 2e-08
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 56 2e-08
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 55 4e-08
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 55 4e-08
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 55 4e-08
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 55 4e-08
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 55 4e-08
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 52 3e-07
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 52 3e-07
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 52 4e-07
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 51 7e-07
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 51 7e-07
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 49 4e-06
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 48 8e-06
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 48 8e-06
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 47 1e-05
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 47 1e-05
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 47 1e-05
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 47 1e-05
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 47 1e-05
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 47 1e-05
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 46 3e-05
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 43 2e-04
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 42 4e-04
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 40 0.002
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 39 0.003
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 38 0.007
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 38 0.007
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 38 0.007
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 36 0.021
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 36 0.021
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 36 0.037
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 36 0.037
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 35 0.064
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 35 0.064
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 33 0.26
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 32 0.34
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 32 0.34
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 32 0.34
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 31 0.79
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 31 0.79
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 31 1.0
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 30 1.4
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 30 1.8
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 30 1.8
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 29 3.2
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 29 3.2
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 5.5
Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 28 7.3
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 7.3
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 27 9.7
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 27 9.7
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 175 bits (427), Expect = 2e-44
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITN+NSFHQTS
Sbjct: 43 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTS 102
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
KWIDDVRTERGSDVIIMLVGNKTD
Sbjct: 103 KWIDDVRTERGSDVIIMLVGNKTD 126
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGM 397
VG + D SDKRQV+T+EG++KAKELNVMFIETSAKAGYNVKQLFRR+A ALPG+
Sbjct: 121 VGNKTD-LSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGI 174
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 167 bits (407), Expect = 5e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDS+VAVVVYDITNANSFHQT+
Sbjct: 44 IGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTT 103
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
KW+DDVR ERG DVII+LVGNKTD
Sbjct: 104 KWVDDVRNERGCDVIIVLVGNKTD 127
Score = 91.9 bits (218), Expect = 4e-19
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAEN 412
VG + D +DKRQVSTE+G+KKA++LNVMFIETSAKAGYNVKQLFR++A ALPG+ +
Sbjct: 122 VGNKTD-LADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGI--VQE 178
Query: 413 KPPEDMHEVILRQSPGDNKE 472
+ PE + +++ P D +E
Sbjct: 179 ETPEQPN-IVIMNPPKDAEE 197
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 94.3 bits (224), Expect = 7e-20
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG FL++T+ L+D T++ ++WDTAGQER+ SL P Y R + A+VVYDITN SF +
Sbjct: 52 IGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAK 111
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ +++ + ++++ L GNK D
Sbjct: 112 NWVKELQRQASPNIVMALAGNKAD 135
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +2
Query: 257 SDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKP 418
++KR V EE + A++ ++F+ETSAK NV +F +A LP + A+ +P
Sbjct: 137 ANKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP-IGPAQGEP 189
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 92.3 bits (219), Expect = 3e-19
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGIDF KT+ L+ + ++LQ+WDTAGQERF ++ SY R + ++VYDITNA SF +
Sbjct: 42 IGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIA 101
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
KW+ ++ DV+ M++GNK D
Sbjct: 102 KWLRNIDEHASEDVVKMILGNKCD 125
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 257 SDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
SD+R VS E G+K A++ + F ETSAK +V F +A A+
Sbjct: 127 SDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAI 170
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 91.9 bits (218), Expect = 4e-19
Identities = 36/84 (42%), Positives = 62/84 (73%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG++F ++ + ++ + ++LQ+WDTAGQE FRS+ SY R + A++VYDIT ++F+ +
Sbjct: 39 IGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT 98
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W++D R S+++IML+GNK+D
Sbjct: 99 SWLEDARQHSNSNMVIMLIGNKSD 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
+G + D +R+V EEG+ A+E ++F+ETSAK NV++ F
Sbjct: 117 IGNKSD-LEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAF 160
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 90.6 bits (215), Expect = 9e-19
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGIDF +T+ L+ + ++LQ+WDTAGQERFR++ +Y R + ++VYDITN SF
Sbjct: 41 IGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIK 100
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
WI ++ SDV M++GNK D
Sbjct: 101 NWIRNIEEHAASDVERMIIGNKCD 124
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVA 379
+G + D ++R+VS + G++ A E F+ETSAKA N+ + F +A
Sbjct: 119 IGNKCD-IEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLA 166
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 90.6 bits (215), Expect = 9e-19
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGIDF +T+ L+ + ++LQ+WDTAGQERFR++ +Y R + ++VYDITN SF
Sbjct: 41 IGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIK 100
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
WI ++ SDV M++GNK D
Sbjct: 101 NWIRNIEEHAASDVERMIIGNKCD 124
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVA 379
+G + D ++R+VS + G++ A E F+ETSAKA N+ + F +A
Sbjct: 119 IGNKCD-IEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLA 166
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGIDF KT+ L+ + ++LQ+WDTAGQERF ++ SY R + ++VYDITNA SF +
Sbjct: 42 IGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIA 101
Query: 183 KWIDDVRTERGSDVIIMLVGNK 248
KW+ ++ DV+ M++GNK
Sbjct: 102 KWLRNIDEHASEDVVKMILGNK 123
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 88.6 bits (210), Expect = 4e-18
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IGIDF +T+ L+ + ++LQ+WDTAGQERFR++ +Y R + ++VYDITN SF
Sbjct: 41 IGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIK 100
Query: 183 KWIDDVRTERGSDVIIMLVGNK 248
WI ++ SDV M++GNK
Sbjct: 101 NWIRNIEEHAASDVERMIIGNK 122
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 87.4 bits (207), Expect = 9e-18
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+G+DF KT+ ++ R V LQLWDTAGQERFRSL SY R + A++VYD+ SF +
Sbjct: 494 LGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVR 553
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
WI+ ++ + I+LVGNK D
Sbjct: 554 DWIETIKESTERSIPIILVGNKVD 577
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 233 VGRQQD-RFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAE 409
VG + D R S V+ +G A + V+F+ETSA G N+ + L ++ E
Sbjct: 572 VGNKVDMRISTPGSVAKTDGASMAAAMGVLFMETSALDGSNIDNAMLALTRELMAVEDVE 631
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+GI+F + + ++ + V+L +WDT GQERFRSL+ SY R + A++VYDIT+ SF+
Sbjct: 39 LGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLE 98
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ D++ D++I+L+GNK+D
Sbjct: 99 HWLTDLQRLGDPDIVIVLIGNKSD 122
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
+G + D +D R+V EEG+ A+E ++F+E SAK V++ F
Sbjct: 117 IGNKSDLEAD-REVRKEEGEAFAREFGLIFMEISAKTNEYVEEAF 160
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF KT+ ++ + V+LQ+WDT GQERFR++ SY R + V+ YDIT SF
Sbjct: 43 IGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQ 102
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+WIDDV +V+ +L+G K D
Sbjct: 103 RWIDDVSKFAAPNVVKLLIGTKCD 126
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMF--IETSAKAGYNVKQLFRRVAAAL 388
+G + D D+R + EE + + N MF +ETSAK NV F +A L
Sbjct: 121 IGTKCD-LEDQRAIEAEEAEM-LQRANGMFAMLETSAKGNVNVDNAFLELATIL 172
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+GIDF KT++ D+ V+LQ+WDTAGQER+R++ +Y R + +++YDITN SF+
Sbjct: 55 VGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQ 114
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W ++T + ++LVGNK D
Sbjct: 115 DWCTQIKTYSWENAQVVLVGNKCD 138
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAE 409
VG + D S+ R VS + G + A +L + F ETSAK NVK +F ++ + M +
Sbjct: 133 VGNKCDMDSE-RVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESL 191
Query: 410 NKPPE 424
+K P+
Sbjct: 192 DKDPQ 196
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+GIDF KT++ D+ V+LQ+WDTAGQER+R++ +Y R + +++YDITN SF+
Sbjct: 55 VGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQ 114
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W ++T + ++LVGNK D
Sbjct: 115 DWCTQIKTYSWENAQVVLVGNKCD 138
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAE 409
VG + D S+ R VS + G + A +L + F ETSAK NVK +F ++ + M +
Sbjct: 133 VGNKCDMDSE-RVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESL 191
Query: 410 NKPPE 424
+K P+
Sbjct: 192 DKDPQ 196
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+GIDF KT++ D+ V+LQ+WDTAGQER+R++ +Y R + +++YDITN SF+
Sbjct: 55 VGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQ 114
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W ++T + ++LVGNK D
Sbjct: 115 DWCTQIKTYSWENAQVVLVGNKCD 138
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAE 409
VG + D S+ R VS + G + A +L + F ETSAK NVK +F ++ + M +
Sbjct: 133 VGNKCDMDSE-RVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESL 191
Query: 410 NKPPE 424
+K P+
Sbjct: 192 DKDPQ 196
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+GIDF KT++ D+ V+LQ+WDTAGQER+R++ +Y R + +++YDITN SF+
Sbjct: 69 VGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQ 128
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W ++T + ++LVGNK D
Sbjct: 129 DWCTQIKTYSWENAQVVLVGNKCD 152
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAE 409
VG + D S+ R VS + G + A +L + F ETSAK NVK +F ++ + M +
Sbjct: 147 VGNKCDMDSE-RVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESL 205
Query: 410 NKPPE 424
+K P+
Sbjct: 206 DKDPQ 210
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/84 (44%), Positives = 58/84 (69%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF +T+ L+ +T++LQ+WDTAGQERFR++ SY R + +VVYDIT+ +F+
Sbjct: 44 IGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVK 103
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ ++ +V +LVGNK D
Sbjct: 104 QWLQEIDRYACENVNKLLVGNKCD 127
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
VG + D + KR V T+ A +L + F+ETSAK+ NV+Q F +A+ +
Sbjct: 122 VGNKCD-LTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEI 172
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 86.6 bits (205), Expect = 1e-17
Identities = 33/84 (39%), Positives = 60/84 (71%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG++F ++++ +E +TV+ Q+WDTAGQER+R++ +Y R + A++VYDI ++
Sbjct: 44 IGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVE 103
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ ++R +++IMLVGNK+D
Sbjct: 104 RWLKELRDHADQNIVIMLVGNKSD 127
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+GID+ +K + + D+ V+LQ+WDTAGQERFRS+ SY RD+ ++VYDI N SF
Sbjct: 36 VGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCR 95
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ ++ V + LVGNK D
Sbjct: 96 NWLSQIKEYGKEAVQVTLVGNKCD 119
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 266 RQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVA 379
R V T+EG + A+ + F+ETSAK G+NV + F +A
Sbjct: 122 RAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLA 159
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+GID+ +K + + D+ V+LQ+WDTAGQERFRS+ SY RD+ ++VYDI N SF
Sbjct: 36 VGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCR 95
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ ++ V + LVGNK D
Sbjct: 96 NWLSQIKEYGKEAVQVTLVGNKCD 119
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 266 RQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVA 379
R V T+EG + A+ + F+ETSAK G+NV + F +A
Sbjct: 122 RAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLA 159
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+GIDF KT++ D+ V+LQ+WDTAGQER+R++ +Y R + +++YDITN SF+
Sbjct: 55 VGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQ 114
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W ++T + ++LVGNK D
Sbjct: 115 DWCTQIKTYSWENAQVVLVGNKCD 138
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL-PGMDSAE 409
VG + D S+ R VS + G + A +L + F ETSAK NVK +F ++ + M +
Sbjct: 133 VGNKCDMDSE-RVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESL 191
Query: 410 NKPPE 424
+K P+
Sbjct: 192 DKDPQ 196
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 85.8 bits (203), Expect = 3e-17
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGS-DVI 227
VRLQ+WDTAGQERFR ++P Y+R++ A++VYD+T+ N+F KW+ D+ G+ D
Sbjct: 105 VRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDAN 164
Query: 228 IMLVGNKTD 254
+ L+GNKTD
Sbjct: 165 VYLIGNKTD 173
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 84.6 bits (200), Expect = 6e-17
Identities = 36/84 (42%), Positives = 58/84 (69%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+G++F K + ++ VRL++WDT GQE FRS+I +Y R++ A++VYDIT SF
Sbjct: 39 LGVEFGYKDLQIDKYKVRLRVWDTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLE 98
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ D+R +++IML+GNK+D
Sbjct: 99 QWLSDLRQHGHPEMVIMLIGNKSD 122
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVA 379
+G + D R V+TEEG+ AK+ + F+ETSAKA +V++ F A
Sbjct: 117 IGNKSD-LKAVRDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTA 164
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IGIDFLSKTMYLE-DRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 179
IG+DF KTM + +R + +QLWDTAGQERFRS+ Y R + V+++D+T+ SF
Sbjct: 235 IGVDFTVKTMKIPPNRAIAMQLWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNV 294
Query: 180 SKWIDDVRTERGSDVIIMLVGNKTD 254
WID VR ++ LVGNK D
Sbjct: 295 RNWIDSVRAGVDDATVMCLVGNKMD 319
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 83.4 bits (197), Expect = 1e-16
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF +M ++ V+L +WDTAGQERFR+L PSY R + + VYD+T+ +SF + +
Sbjct: 17 IGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLN 76
Query: 183 KWIDDVRTERGSDVII-MLVGNKTD 254
W+ +V T +D II M+V NK D
Sbjct: 77 HWMQEVDTYCTNDNIIKMMVANKID 101
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 245 QDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRV 376
++ F R V+ EEG K AK +FIE SAK V+ F +
Sbjct: 115 KNNFQPNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEEL 158
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 83.4 bits (197), Expect = 1e-16
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF +M ++ V+L +WDTAGQERFR+L PSY R + + VYD+T+ +SF + +
Sbjct: 44 IGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLN 103
Query: 183 KWIDDVRTERGSDVII-MLVGNKTD 254
W+ +V T +D II M+V NK D
Sbjct: 104 HWMQEVDTYCTNDNIIKMMVANKID 128
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 266 RQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRV 376
R V+ EEG K AK +FIE SAK V+ F +
Sbjct: 132 RVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEEL 168
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 83.0 bits (196), Expect = 2e-16
Identities = 32/84 (38%), Positives = 58/84 (69%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG++F ++++ +E +TV+ Q+WDTAGQER+R++ +Y R + A++VYDI ++
Sbjct: 44 IGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVE 103
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ ++R +++IM VGNK D
Sbjct: 104 RWLKELRDHADQNIVIMPVGNKCD 127
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF +TM + + V+LQ+WDTAGQERFR++ +Y R + VVVYD+TN SF
Sbjct: 43 IGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVK 102
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ ++ S V +LVGNK +
Sbjct: 103 RWLQEIENNCDS-VQKVLVGNKCE 125
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG+DF+ KT+ + + ++LQ+WDTAGQERFRS+ SY R + V+VYD++ SF
Sbjct: 40 IGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLP 99
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ ++ + V+ +LVGNK D
Sbjct: 100 EWLGEIESYANRRVLKILVGNKVD 123
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVM--FIETSAKAGYNVKQLFRRVAAAL 388
VG + D+ D+R+V G + ++N F+ETSA NV QLF +VA L
Sbjct: 118 VGNKVDK-GDEREVPERIG-RDFSDVNQFDYFLETSALDATNVDQLFEQVATRL 169
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 81.8 bits (193), Expect = 4e-16
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG++F +K + +E + V++Q+WDTAG ERFR SY R + A++VYDI+ ++
Sbjct: 41 IGVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVE 100
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
+W+ +R D++I LVGNK+D
Sbjct: 101 QWLKVLRDHANEDIVITLVGNKSD 124
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 81.4 bits (192), Expect = 6e-16
Identities = 33/84 (39%), Positives = 57/84 (67%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG++F ++ + + + ++LQ+WDTAGQERFR++ SY R + A++VYDIT ++++ S
Sbjct: 44 IGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS 103
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ D ++ + I L+GNK D
Sbjct: 104 SWLADAKSLTNPNTAIFLIGNKAD 127
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVA 379
+G + D D+R V EE A+E + F+E SAK G NV+ F A
Sbjct: 122 IGNKAD-LEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETA 169
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 179
IGIDF K + L D +++RLQLWDTAGQERFR L P+YIR + VA++V D+++ N
Sbjct: 39 IGIDFKHKIVQLNDGQSIRLQLWDTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHL 98
Query: 180 SKWIDDVRTERGSDVIIMLVGNKTD 254
+W + + ++VGNK D
Sbjct: 99 IRWKGIIDKNKSDFTSTIIVGNKHD 123
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVA 379
VG + D S+KR +E N +IETSAK N+K+LF VA
Sbjct: 118 VGNKHDLVSEKRSPRLTA---IIRETNDEYIETSAKMRKNIKKLFSSVA 163
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+G+DF KT+ L +RL+LWDTAG ER+R++ SY + + VYD+TN SF
Sbjct: 39 LGVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLE 98
Query: 183 K-WIDDVRTERGSDVIIMLVGNKTD 254
K W+ +++ + ++MLVGNK D
Sbjct: 99 KYWLKEIKQHAPPNAVLMLVGNKAD 123
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 77.8 bits (183), Expect = 7e-15
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
IG DFL++ + ++DRTV LQ+WDTAGQERF+SL ++ R + V+ +D+TNA SF
Sbjct: 42 IGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLD 101
Query: 183 KWIDDV---RTERGSDVI-IMLVGNKTD 254
W D+ + R D +L+GNK D
Sbjct: 102 SWRDEFLIQASPRDPDHFPFVLLGNKVD 129
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
I F +KT+ +ED L +WDTAGQE++ +L P Y R S ++V+DIT+ SF +
Sbjct: 45 IQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVK 104
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W+ +++T G+ I++VGNK D
Sbjct: 105 NWVLEIKTCLGNTAEILIVGNKID 128
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
VG + D ++RQV+ ++ + A+ +++ETSA+ + F + A +
Sbjct: 123 VGNKID-LEEERQVTRQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKM 173
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDR-TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 179
+G+DF ++ + L V+LQLWDTAGQE+FRS+ SY R+S + +YD TN SF
Sbjct: 50 VGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHV 109
Query: 180 SKWIDDVRTERG----SDVIIMLVGNKTD 254
W+ + G S + LVG K+D
Sbjct: 110 ENWVKEAALNLGGPSPSKCVFQLVGTKSD 138
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPG-MDSAE 409
VG + D S +RQV+ EEG+ AK + FIETS++ G NV + F +A + +D E
Sbjct: 133 VGTKSDMDS-QRQVNYEEGEYFAKYHKMKFIETSSRTGDNVNEAFHMIAQEIQNRVDDGE 191
Query: 410 NKP 418
+P
Sbjct: 192 LRP 194
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFR-SLIPSYIRDSTVAVVVYDITNANSFHQT 179
IG+DF ++ +E+ +R+QLWDTAGQER+R S++ Y R+ V VYD+T SF+
Sbjct: 133 IGVDFRERSCVIENELLRVQLWDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDL 192
Query: 180 SKWIDDVRTE---RGSDVIIMLVGNKTD 254
+ WI + S+V +L+GNK D
Sbjct: 193 ALWIKECEKHGLVGDSEVPRILIGNKCD 220
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 64.9 bits (151), Expect = 5e-11
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 IGIDFLSK-TMYLEDR--------TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDIT 155
+GIDF K +Y R V LQLWDTAGQERFRSL ++ RD+ ++++DIT
Sbjct: 40 VGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDIT 99
Query: 156 NANSFHQTSKWIDDVRTERGSD-VIIMLVGNKTD 254
N SF W+ ++ + I++ GNK D
Sbjct: 100 NEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKAD 133
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 236 GRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQ 361
G + D ++RQVST + A +L + + ETSA NV++
Sbjct: 129 GNKAD-LENRRQVSTARAKQLADQLGLPYFETSACTSTNVEK 169
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 64.9 bits (151), Expect = 5e-11
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Frame = +3
Query: 3 IGIDFLSK-TMYLEDR--------TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDIT 155
+GIDF K +Y R V LQLWDTAGQERFRSL ++ RD+ ++++DIT
Sbjct: 40 VGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDIT 99
Query: 156 NANSFHQTSKWIDDVRTERGSD-VIIMLVGNKTD 254
N SF W+ ++ + I++ GNK D
Sbjct: 100 NEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKAD 133
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 236 GRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQ 361
G + D ++RQVST + A +L + + ETSA NV++
Sbjct: 129 GNKAD-LENRRQVSTARAKQLADQLGLPYFETSACTSTNVEK 169
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 IGIDFLSKTMYL-EDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 179
+G+DF S+ + L + V +Q+WD GQ +I Y+ + + +VYD+TN+ SF
Sbjct: 68 LGLDFFSRRITLPHEMQVLVQVWDIGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENA 127
Query: 180 SKWIDDVRTERGSD---VIIMLVGNKTD 254
W+ V+ S V ++L+GNKTD
Sbjct: 128 VDWLSVVKKNTKSSETPVKLVLMGNKTD 155
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
DF K + ++ + L++ DTAG E+F S+ YI++ VVVY IT+ +FH
Sbjct: 38 DFYRKEIEVDGQPSVLEILDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMK 97
Query: 192 DDVRTERGSD-VIIMLVGNKTD 254
+ + +GS+ V I+LVGNK D
Sbjct: 98 EQIVRVKGSENVPILLVGNKCD 119
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRV 376
VG + D S +RQV +EEG A+ + F E SAK NV F +
Sbjct: 114 VGNKCD-LSHQRQVRSEEGLALAESWSCPFTECSAKNNQNVNVTFAEI 160
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTV-RLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 179
IG+DF K + +++ TV LQ+WD +GQ+R+ + Y +D+ A++V D T +
Sbjct: 44 IGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGA 103
Query: 180 SKWIDD----VRTERGSDVIIMLVGNKTD 254
+W D V GS V +L+ NK D
Sbjct: 104 LRWKTDLDQKVTLADGSPVPAILLANKCD 132
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTV-RLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 179
IG+DF K + +++ TV LQ+WD +GQ+R+ + Y +D+ A++V D T +
Sbjct: 44 IGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGA 103
Query: 180 SKWIDD----VRTERGSDVIIMLVGNKTD 254
+W D V GS V +L+ NK D
Sbjct: 104 LRWKTDLDQKVTLADGSPVPAILLANKCD 132
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTA 77
IGIDFLSKTMYLEDRTVRLQ+WDTA
Sbjct: 43 IGIDFLSKTMYLEDRTVRLQMWDTA 67
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D +K ++++ +L++ DTAGQE F ++ Y+R + ++V+ +T+ NSF + K
Sbjct: 52 DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLH 111
Query: 192 DDV-RTERGSDVIIMLVGNKTD 254
+ + R + D I+LVGNK D
Sbjct: 112 ELICRIKDRDDFPIILVGNKAD 133
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D +K ++++ +L++ DTAGQE F ++ Y+R + ++V+ +T+ NSF + K
Sbjct: 52 DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLH 111
Query: 192 DDV-RTERGSDVIIMLVGNKTD 254
+ + R + D I+LVGNK D
Sbjct: 112 ELICRIKDRDDFPIILVGNKAD 133
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D +K ++++ +L++ DTAGQE F ++ Y+R + ++V+ +T+ NSF + K
Sbjct: 52 DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLH 111
Query: 192 DDV-RTERGSDVIIMLVGNKTD 254
+ + R + D I+LVGNK D
Sbjct: 112 ELICRIKDRDDFPIILVGNKAD 133
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D +K ++++ +L++ DTAGQE F ++ Y+R + ++V+ +T+ NSF + K
Sbjct: 52 DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLH 111
Query: 192 DDV-RTERGSDVIIMLVGNKTD 254
+ + R + D I+LVGNK D
Sbjct: 112 ELICRIKDRDDFPIILVGNKAD 133
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS-KW 188
D S + ++ + +RLQL DTAGQ F +L P D+ V V+VY + + SF S W
Sbjct: 44 DNFSVVVLVDKKPIRLQLHDTAGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHW 103
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+V T+R ++LVG + D
Sbjct: 104 YPEV-TKRNPGTKLILVGTQAD 124
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 233 VGRQQD-RFSDKRQVSTE-EGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSA 406
VG Q D R+ + T+ G A L F E SA +N+KQ+F AA L G++
Sbjct: 119 VGTQADQRWQVRGNTVTQLRGKALADRLGAEFFECSALTQHNLKQMFD--AAILAGLEGK 176
Query: 407 ENK 415
+N+
Sbjct: 177 KNR 179
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSF-HQTSKW 188
D S M L+ V L LWDTAGQE + L P + V ++ + + + SF + SKW
Sbjct: 42 DNYSAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKW 101
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
I ++R + D ++LVG K D
Sbjct: 102 IPEIR-QHCPDAPVILVGTKLD 122
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D K ++ RL++ DTAG E+F + +Y R + V+V+ + ++F +
Sbjct: 38 DSYRKLSKVDAENARLEILDTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTF 97
Query: 192 DDVRTERGSDVIIMLVGNKTD 254
D+ RG +V ++LVGNK+D
Sbjct: 98 TDIIAIRGKEVPMILVGNKSD 118
Score = 35.1 bits (77), Expect = 0.048
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 388
VG + D ++ RQV E A++L + + ETSA+ NV ++F A +
Sbjct: 113 VGNKSD-LAETRQVDESEAHNFAEKLKIPYFETSARLNQNVSEVFEECAVLI 163
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSF-HQTSKW 188
D S M L+ V L LWDTAGQE + L P + V ++ + + + SF + SKW
Sbjct: 42 DNYSAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKW 101
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
I ++R + D ++LVG K D
Sbjct: 102 IPEIR-QHCPDAPVILVGTKLD 122
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = +3
Query: 66 WDTAGQERFR-SLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE---RGSDVIIM 233
WDTAGQER+R S++ Y R+ V VYD+T SF+ + WI + S+V +
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRI 60
Query: 234 LVGNK 248
L+GNK
Sbjct: 61 LIGNK 65
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D K + ++ T L + DTAGQE + ++ Y+R ++V+ + A SF + +
Sbjct: 38 DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYR 97
Query: 192 DDVRTERGS-DVIIMLVGNKTD 254
+ +R + S DV ++LVGNK D
Sbjct: 98 EQIRRVKDSDDVPMVLVGNKCD 119
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D K + ++ T L + DTAGQE + ++ Y+R ++V+ + A SF + +
Sbjct: 41 DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYR 100
Query: 192 DDVRTERGS-DVIIMLVGNKTD 254
+ +R + S DV ++LVGNK D
Sbjct: 101 EQIRRVKDSDDVPMVLVGNKCD 122
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTS 182
+G++ + +R +WDTAGQE+F L Y A++++D+T ++
Sbjct: 42 LGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVP 101
Query: 183 KWIDDVRTERGSDVIIMLVGNKTD 254
W D+ ++ I+L GNK D
Sbjct: 102 NWHRDL-ARVCENIPIVLCGNKVD 124
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLW 68
IGIDFLSKTMYLEDRT+RLQ+W
Sbjct: 44 IGIDFLSKTMYLEDRTIRLQIW 65
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKWIDDVRTER 212
++ + V L LWDTAGQE + L P D+ V ++ + I + +S KW +VR
Sbjct: 48 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVR-HF 106
Query: 213 GSDVIIMLVGNKTD 254
+V I+LVGNK D
Sbjct: 107 CPNVPIILVGNKRD 120
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKWIDDVRTER 212
++ + V L LWDTAGQE + L P D+ V ++ + I + +S KW +VR
Sbjct: 48 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVR-HF 106
Query: 213 GSDVIIMLVGNKTD 254
+V I+LVGNK D
Sbjct: 107 CPNVPIILVGNKRD 120
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D S + ++ R + L LWDTAGQE + L P + V +V + + N SF +KW
Sbjct: 38 DNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+V + + I+LVG K D
Sbjct: 98 YPEV-SHHCPNTPIILVGTKAD 118
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D S + ++ R + L LWDTAGQE + L P + V +V + + N SF +KW
Sbjct: 38 DNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+V + + I+LVG K D
Sbjct: 98 YPEV-SHHCPNTPIILVGTKAD 118
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D S + ++ R + L LWDTAGQE + L P + V +V + + N SF +KW
Sbjct: 38 DNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+V + + I+LVG K D
Sbjct: 98 YPEV-SHHCPNTPIILVGTKAD 118
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D S + ++ R + L LWDTAGQE + L P + V +V + + N SF +KW
Sbjct: 38 DNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+V + + I+LVG K D
Sbjct: 98 YPEV-SHHCPNTPIILVGTKAD 118
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D S + ++ R + L LWDTAGQE + L P + V +V + + N SF +KW
Sbjct: 38 DNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+V + + I+LVG K D
Sbjct: 98 YPEV-SHHCPNTPIILVGTKAD 118
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D K + L+ + + DTAGQE + ++ +Y R + V+ I + SF T+++
Sbjct: 52 DSYRKKVVLDGEECSIDILDTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFR 111
Query: 192 DDVRTERGSD--VIIMLVGNKTD 254
+ + + SD V I+LVGNK D
Sbjct: 112 EQILRVKNSDSSVPIVLVGNKGD 134
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
VG + D D+R VS E ++A++ ++ETSAK NV ++F
Sbjct: 129 VGNKGD-MRDQRVVSAELCRQRAEQWGCHYVETSAKRRENVDKVF 172
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +3
Query: 39 EDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGS 218
E R + +Q+ D++G F + YI + +VV+ +A+S + + D+ RG+
Sbjct: 67 EGRVLMVQIIDSSGSRDFIGMKNLYIGTADAFLVVFAADDASSLEEALSTLSDIHARRGN 126
Query: 219 DVIIMLVGNKTD 254
V ++LV NKTD
Sbjct: 127 SVPVLLVANKTD 138
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTER 212
++ V + + DTAGQE F ++ YIR ++V+ +T SF + K + V R +
Sbjct: 60 IDGNWVIMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKD 119
Query: 213 GSDVIIMLVGNKTD 254
S+ ++LV NK D
Sbjct: 120 RSEYPVLLVANKVD 133
Score = 34.3 bits (75), Expect = 0.084
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 260 DKRQVSTEEGDKKAKELNVMFIETSAK-AGYNVKQLFRRVAAALPGMDSAENKPPEDMHE 436
++R VS +EG + A +L +M+IETSAK NV F + + S E HE
Sbjct: 136 NQRVVSEQEGRELAAQLKLMYIETSAKEPPVNVDAAFHELVRIVRSFPSDEGD-----HE 190
Query: 437 VILRQSPGDNKEQD 478
+ P K +D
Sbjct: 191 ASMASVPRTKKRKD 204
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTER 212
++ V + + DTAGQE F ++ YIR ++V+ +T SF + K + V R +
Sbjct: 60 IDGNWVIMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKD 119
Query: 213 GSDVIIMLVGNKTD 254
S+ ++LV NK D
Sbjct: 120 RSEYPVLLVANKVD 133
Score = 34.3 bits (75), Expect = 0.084
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 260 DKRQVSTEEGDKKAKELNVMFIETSAK-AGYNVKQLFRRVAAALPGMDSAENKPPEDMHE 436
++R VS +EG + A +L +M+IETSAK NV F + + S E HE
Sbjct: 136 NQRVVSEQEGRELAAQLKLMYIETSAKEPPVNVDAAFHELVRIVRSFPSDEGD-----HE 190
Query: 437 VILRQSPGDNKEQD 478
+ P K +D
Sbjct: 191 ASMASVPRTKKRKD 204
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
D K + ++ + L++ DTAG E+F ++ Y+++ V+VY IT ++F+
Sbjct: 38 DSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLR 97
Query: 192 DDV-RTERGSDVIIMLVGNKTD 254
D + R + +V ++LVGNK D
Sbjct: 98 DQILRVKDTDEVPMILVGNKCD 119
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
VG + D D+R V ++G A++ F+ETSAKA NV ++F
Sbjct: 114 VGNKCD-LEDERVVGKDQGQNLARQFGSAFLETSAKAKINVSEVF 157
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D S + ++ R + L LWDTAGQ+ + + V +V + + N SF +KW
Sbjct: 38 DTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+V + + I+LVG K D
Sbjct: 98 YPEV-SHHCPNTPIILVGTKAD 118
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D S + ++ R + L LWDTAGQ+ + + V +V + + N SF +KW
Sbjct: 38 DTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+V + + I+LVG K D
Sbjct: 98 YPEV-SHHCPNTPIILVGTKAD 118
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAA 382
VG ++D S KR+VS+ G K A + FIETSAK N+ +LF+++ A
Sbjct: 50 VGNKKDEES-KREVSSNSGQKVATNMECGFIETSAKNNENITELFQQLLA 98
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 27 TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVR 203
+++++++ + L+DTAGQ + + + V +V + + + + S WI ++R
Sbjct: 44 SVHIDNKNYAVNLFDTAGQGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIR 103
Query: 204 TERGSDVIIMLVGNKTD 254
G +V IMLVG K D
Sbjct: 104 KYAGDNVPIMLVGTKND 120
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD- 197
SK + R L++ DTAGQ+ + S D ++VY I + SF S +
Sbjct: 51 SKHIAAFHRDYHLRVTDTAGQQEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKI 110
Query: 198 VRTERGSDVIIMLVGNKTD 254
VRT + + I++VGNKTD
Sbjct: 111 VRTYGDTSIPIVIVGNKTD 129
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 233 VGRQQDRFSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLF 367
VG + D S +R V EEG++ A++ + F+E +A+ V ++F
Sbjct: 124 VGNKTD-LSTQRVVRAEEGEELARQWDAKFVEITARESNRVHEVF 167
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQ 83
IG+DF KT+ ++ + V+LQ+WDTAG+
Sbjct: 43 IGVDFTMKTLVVDGKRVKLQIWDTAGE 69
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAG 80
IG+DF +T+ L+ +T++LQ+WDTAG
Sbjct: 44 IGVDFKIRTIELDGKTIKLQIWDTAG 69
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI- 227
V ++LWD GQ RFRS+ Y R V + D + + + + + D I
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIP 124
Query: 228 IMLVGNKTD 254
++++GNK D
Sbjct: 125 VLVLGNKKD 133
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 39 EDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 191
E RT L+LWD G R + + A++V+D+TN S + W+
Sbjct: 62 EQRTELLELWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENLATWL 112
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI- 227
V ++LWD GQ RFRS+ Y R V + D + + + + + D I
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIP 124
Query: 228 IMLVGNKTD 254
++++GNK D
Sbjct: 125 VLVLGNKKD 133
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 188
+ F KT++ +D +L LWD GQ+ RS +Y + + V D ++ Q S+
Sbjct: 48 LGFDIKTVHFKD--FQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEE 105
Query: 189 IDD-VRTERGSDVIIMLVGNKTD 254
+ + ER + ++++ NK+D
Sbjct: 106 LKKLLGEERLAGASLLVLANKSD 128
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/28 (42%), Positives = 23/28 (82%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAGQE 86
IG++F ++ + ++ + ++LQ+WDTAGQE
Sbjct: 39 IGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.037
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D + T+ + L L+DTAGQE + L P + V +V + + SF KW
Sbjct: 38 DNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKW 97
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+ ++ + S +LVG + D
Sbjct: 98 VPEI-SHHCSKTPFLLVGTQVD 118
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +2
Query: 263 KRQVSTEEGDKKAKELN-VMFIETSAKAGYNVKQLF-RRVAAAL 388
++ VST+ G+K AKEL V ++E SA +K +F + AAL
Sbjct: 134 QKPVSTDVGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL 177
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 35.5 bits (78), Expect = 0.037
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKW 188
D + T+ + L L+DTAGQE + L P + V +V + + SF KW
Sbjct: 35 DNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKW 94
Query: 189 IDDVRTERGSDVIIMLVGNKTD 254
+ ++ + S +LVG + D
Sbjct: 95 VPEI-SHHCSKTPFLLVGTQVD 115
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +2
Query: 263 KRQVSTEEGDKKAKELN-VMFIETSAKAGYNVKQLF-RRVAAAL 388
++ VST+ G+K AKEL V ++E SA +K +F + AAL
Sbjct: 131 QKPVSTDVGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL 174
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.064
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIM 233
L L+DTAGQE + L P + V +V + + SF KW+ ++ + S +
Sbjct: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEI-SHHCSKTPFL 111
Query: 234 LVGNKTD 254
LVG + D
Sbjct: 112 LVGTQVD 118
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 263 KRQVSTEEGDKKAKELN-VMFIETSAKAGYNVKQLF-RRVAAAL 388
++ VST G+K AKEL V ++E SA +K +F + AAL
Sbjct: 134 QKPVSTYVGEKLAKELKAVKYVECSALTEKELKNVFDEAILAAL 177
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFH-QTSKWIDDVRTERGSDVIIM 233
L WD GQE R L +Y D+ + V D T ++ F S++ + + E ++ ++
Sbjct: 71 LHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQNIPVL 130
Query: 234 LVGNKTD 254
+ NK++
Sbjct: 131 VAVNKSE 137
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG-SD 221
+ ++ +WD GQ++ R L Y + + V D + + + + + +R +
Sbjct: 55 KNIKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKE 114
Query: 222 VIIMLVGNKTD 254
II++ NK D
Sbjct: 115 AIILVFANKQD 125
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-RGSDVI 227
+ L +WD GQ++ R+L Y ++T V V D ++ + + + + E +D
Sbjct: 61 ITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSH 120
Query: 228 IMLVGNKTD 254
+++ NK D
Sbjct: 121 LLVFANKQD 129
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDT 74
IG+DF +TM + + V+LQ+WDT
Sbjct: 43 IGVDFKIRTMDINGQRVKLQIWDT 66
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 81 QERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 254
QE+F L Y A++++D+T ++ W D+ ++ I+L GNK D
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDL-ARVCENIPIVLCGNKVD 58
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-R 212
+E + + +WD GQ++ R L Y +++ + V D + ++ + + + E
Sbjct: 56 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDE 115
Query: 213 GSDVIIMLVGNKTD 254
D +++ NK D
Sbjct: 116 LRDATLLVFANKQD 129
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-R 212
+E + + +WD GQ++ R L Y +++ + V D + ++ + + + E
Sbjct: 56 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDE 115
Query: 213 GSDVIIMLVGNKTD 254
D +++ NK D
Sbjct: 116 LRDATLLVFANKQD 129
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQLWDTAG 80
IG++F ++ + + + ++LQ+WDTAG
Sbjct: 44 IGVEFGTRIIEVSGQKIKLQIWDTAG 69
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD-VRTERGSDVI 227
+RL +WD GQ R +Y + + V D + F + + + + + E+ V
Sbjct: 62 IRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVP 121
Query: 228 IMLVGNKTD 254
+++ NK D
Sbjct: 122 VLIFANKQD 130
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-R 212
+E + + +WD GQ++ R L Y +++ + V D + + + + + E
Sbjct: 56 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDE 115
Query: 213 GSDVIIMLVGNKTD 254
D ++++ NK D
Sbjct: 116 LRDAVLLVFANKQD 129
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 12 DFLSKTMYLEDRTVRLQLWDTAGQERFRSL 101
D S + ++ R + L LWDTAGQE + L
Sbjct: 38 DNYSANVMVDGRPINLGLWDTAGQEDYDRL 67
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 393 PGRAAATLRNNCLTL*PALALVSMNITFSSLAFLSPSSVETCLLS 259
PG+ A N + AL+S+ +TF F S V CLLS
Sbjct: 111 PGKYAKLSINYYYLMVTLCALISLLVTFCKFVFYSDEVVTNCLLS 155
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -1
Query: 482 CCPAPCCRRAIVSRSPRACLREVCFRQSPCQAGQQLLFGITV 357
CCP PC R CL + R PCQ QQ GIT+
Sbjct: 264 CCPRPC-RDPTPLYVNGQCL-SIAHRGDPCQIDQQCEGGITM 303
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 272 VSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMHEVILR 448
VS EG AK F+E SA+ N+ +L+ + L + +P MH ++ R
Sbjct: 295 VSKMEGACLAKVHKCNFVEVSAQYSMNISELWTIILKQLQAPKAELEEPNGWMHRIVTR 353
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD-VRTERGSD 221
R + +WD GQE R +Y + V +VV D ++ + + + ++ E +
Sbjct: 59 RNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLAR 118
Query: 222 VIIMLVGNKTD 254
I+++ NK D
Sbjct: 119 AHILVLANKQD 129
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 5.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 485 NCCPAPCCR 459
NCCP PCCR
Sbjct: 95 NCCPKPCCR 103
>Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical
protein T23G4.3 protein.
Length = 485
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = -2
Query: 328 LYEHHVQFLGLLVAFLGRDLPLVRESVLLPTNMMMTSEPRSVRTSSIHFEVWWNEFALVI 149
+Y H L +F+GR + R+ L T + + S R + V ++EF V+
Sbjct: 167 VYARHPIVLSRGESFIGRLENIDRKLAELITQFVANHDKHSFRAGNFSVAVGFDEFPPVL 226
Query: 148 S*TTTATVESLM 113
TTA +++M
Sbjct: 227 KWRTTAENKTIM 238
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 281 EEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMHEVILR 448
E DKK ++LNVM +E +K V + + + G +S EN E+ + ILR
Sbjct: 101 EISDKKFEKLNVMLVELDSKKAMQVAVI--KYISPFSGGNSVEN--GEETRDGILR 152
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 27.9 bits (59), Expect = 7.3
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 248 DRFSDKRQVSTEEGDKKAKEL-NVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPE 424
D D+ + EE +++ ++ NV I++ A +KQ+ AAA DS E++ E
Sbjct: 430 DEDEDEEEEEDEEDEEEEEDTTNVPLIKSKADL---LKQIAANRAAASAAQDSDEDEDEE 486
Query: 425 DMHEVILRQSPGDNKEQD 478
D E + + + +E+D
Sbjct: 487 D-EEDVEEEDEEEEEEED 503
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 3 IGIDFLSKTMYLEDRTVRLQ 62
IG DFL++ + ++DRTV LQ
Sbjct: 51 IGADFLTRDVNIDDRTVTLQ 70
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 272 VSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMHEVILR 448
+ST EG A+ F+E SA G N ++ + + L + +E + P + ++ R
Sbjct: 297 ISTNEGKSVARTFKCDFLEVSALLGMNTEETWTTILKEL--QEPSERRRPSWVERMLNR 353
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,289,548
Number of Sequences: 27780
Number of extensions: 340820
Number of successful extensions: 1173
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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