Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0052
(603 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 156 4e-37
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 153 4e-36
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 137 2e-31
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 134 2e-30
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 110 3e-23
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 85 1e-15
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 83 4e-15
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 83 4e-15
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 83 6e-15
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 82 1e-14
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 79 6e-14
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 79 8e-14
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 78 2e-13
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 77 4e-13
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 76 7e-13
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 72 9e-12
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 72 9e-12
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 71 3e-11
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 66 5e-10
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 60 4e-08
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 56 6e-07
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 50 6e-05
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 45 0.001
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 44 0.002
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 44 0.003
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 44 0.004
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 43 0.006
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 42 0.008
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 39 0.10
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 37 0.32
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 37 0.42
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 36 0.56
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 35 1.3
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 35 1.7
UniRef50_A7QB06 Cluster: Chromosome chr5 scaffold_72, whole geno... 33 3.9
UniRef50_A5AQ20 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 33 3.9
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 33 3.9
UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 6.9
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 33 6.9
UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n... 33 6.9
UniRef50_A0UYZ7 Cluster: FolC bifunctional protein; n=1; Clostri... 32 9.1
UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, wh... 32 9.1
UniRef50_Q304D6 Cluster: Putative uncharacterized protein; n=4; ... 32 9.1
UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;... 32 9.1
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 32 9.1
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 156 bits (378), Expect = 4e-37
Identities = 69/86 (80%), Positives = 81/86 (94%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 75 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 134
Query: 435 GRPGFNVAHRRRKTGKVGFPHRLTKK 512
GRPGF++A ++R+TG +G HR++K+
Sbjct: 135 GRPGFSIADKKRRTGCIGAKHRISKE 160
Score = 130 bits (315), Expect = 2e-29
Identities = 63/79 (79%), Positives = 67/79 (84%)
Frame = +1
Query: 46 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 225
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 226 NEKIAVHCTVEELKQKKSL 282
NEKIAVHCTV K ++ L
Sbjct: 65 NEKIAVHCTVRGAKAEEIL 83
Score = 33.9 bits (74), Expect = 3.0
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +2
Query: 506 KEDAMKWFQQKYDG 547
KE+AM+WFQQKYDG
Sbjct: 159 KEEAMRWFQQKYDG 172
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 153 bits (370), Expect = 4e-36
Identities = 68/86 (79%), Positives = 80/86 (93%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 129 RGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 188
Query: 435 GRPGFNVAHRRRKTGKVGFPHRLTKK 512
GR GF++A ++R+TG +G HR++K+
Sbjct: 189 GRSGFSIADKKRRTGCIGAKHRISKE 214
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +1
Query: 163 TGQQPVFSKARYTVRSFGIRRNEKIAVHCTVEELKQKKSL 282
+GQ PV SKARYTVRSFGIRRNEKIAVHCTV K ++ L
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIL 137
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 137 bits (331), Expect = 2e-31
Identities = 63/86 (73%), Positives = 71/86 (82%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G+DFYVV+
Sbjct: 72 RGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVM 131
Query: 435 GRPGFNVAHRRRKTGKVGFPHRLTKK 512
RPG V R+R G VG H+ TK+
Sbjct: 132 NRPGARVTRRKRCKGTVGNSHKTTKE 157
Score = 108 bits (260), Expect = 9e-23
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = +1
Query: 55 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 234
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEK
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEK 64
Query: 235 IAVHCTVEELKQKKSL-RGV 291
IAVH TV K ++ L RG+
Sbjct: 65 IAVHVTVRGPKAEEILERGL 84
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 134 bits (324), Expect = 2e-30
Identities = 64/93 (68%), Positives = 72/93 (77%)
Frame = +3
Query: 231 KDCCPLYSRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 410
K C + RG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIY
Sbjct: 66 KIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 125
Query: 411 GLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTK 509
G+DFYVVL RPG+ VA RRR +VG HR+TK
Sbjct: 126 GMDFYVVLERPGYRVARRRRCKTRVGIQHRVTK 158
Score = 108 bits (260), Expect = 9e-23
Identities = 55/80 (68%), Positives = 63/80 (78%)
Frame = +1
Query: 43 SEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 222
SE N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIR
Sbjct: 3 SEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIR 62
Query: 223 RNEKIAVHCTVEELKQKKSL 282
RNEKIA + TV K + L
Sbjct: 63 RNEKIACYVTVRGEKAMQLL 82
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 110 bits (264), Expect = 3e-23
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = +1
Query: 46 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 225
++ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRR
Sbjct: 32 QETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRR 91
Query: 226 NEKIAVHCTV 255
NEKI+V CT+
Sbjct: 92 NEKISVFCTI 101
Score = 82.2 bits (194), Expect = 9e-15
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYDP GI+ +
Sbjct: 102 RGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYGLLCCV 161
Query: 435 GRPGFNVAHRRRKTGKVG 488
+ ++ K K+G
Sbjct: 162 VKTRIESCSKKIKKFKIG 179
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 85.0 bits (201), Expect = 1e-15
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 431
RG +A E L++ L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+D +
Sbjct: 96 RGQRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILT 155
Query: 432 LGRPGFNVAHRRRKTGKVGFPHRLTKK 512
+ RPG+ VA RRR K+ HR+TK+
Sbjct: 156 IERPGYRVARRRRARSKIPRRHRVTKE 182
Score = 68.9 bits (161), Expect = 9e-11
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = +1
Query: 82 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTV 255
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR E IAV T+
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTL 95
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 83.4 bits (197), Expect = 4e-15
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +3
Query: 240 CPLYSRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 416
C + RG +A++ LE L + + L R F + GN FGI+EH D G+KYDP+IG++G+
Sbjct: 63 CKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGM 122
Query: 417 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLT 506
D VV+ RPG + RR T K+ HR+T
Sbjct: 123 DVTVVIKRPGERICKRRIATRKIPTNHRVT 152
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = +1
Query: 61 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 240
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 241 VHCTVEELKQKKSL 282
T+ + ++ L
Sbjct: 63 CKVTLRGQRAQQFL 76
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 431
RG KA + L+ L V+E L R + G F FGI EHIDL G+ YDP +GI+G+D V
Sbjct: 79 RGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVDYDPDVGIFGMDVCVS 137
Query: 432 LGRPGFNVAHRRRKTGKVGFPHRLTKK 512
L R G+ VA RRRK K+ HR+TK+
Sbjct: 138 LKRRGYRVARRRRKKAKIATSHRVTKE 164
Score = 62.9 bits (146), Expect = 6e-09
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +1
Query: 55 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 234
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+ E
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEA 71
Query: 235 IAVHCTVEELKQKKSLR 285
I + T+ K K L+
Sbjct: 72 IGIKVTLRGEKALKFLK 88
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 82.6 bits (195), Expect = 6e-15
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 240 CPLYSRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 416
C + RG +A+E L ++ E L R F + GN FGI+EH D G++YDP+IG++G+
Sbjct: 63 CKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGM 122
Query: 417 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLT 506
D VVL RPG + RR T K+ HR+T
Sbjct: 123 DVTVVLKRPGERICKRRIATRKIPTDHRVT 152
Score = 49.6 bits (113), Expect = 6e-05
Identities = 25/74 (33%), Positives = 44/74 (59%)
Frame = +1
Query: 61 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 240
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 241 VHCTVEELKQKKSL 282
T+ + ++ L
Sbjct: 63 CKVTLRGQRAQEFL 76
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = +3
Query: 240 CPLYSRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 416
C L RG KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G+
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
Query: 417 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKKML*SGSNRNMMVSYL 557
+ V +PG+ +A RR + KV HR++K+ N V+Y+
Sbjct: 122 NVSVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFNVNYV 168
Score = 56.4 bits (130), Expect = 5e-07
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +1
Query: 61 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 240
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ + IA
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 241 VHCTVEELKQKKSLRGV*KSENMN 312
T+ K K++ V + N N
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKN 85
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 79.4 bits (187), Expect = 6e-14
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ E I
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENI 83
Query: 238 AVHCTVEELKQKKSLR 285
AV T+ K L+
Sbjct: 84 AVMVTLRGEKALNFLK 99
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 431
RG KA L+R L + ++ + GN FGI+EHI + G+KYDP +GI G+D +
Sbjct: 90 RGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDVAIT 149
Query: 432 LGRPGFNVAHRRR-KTGKVGFPHRLTKK 512
+ RPG + RRR + G + HR+T++
Sbjct: 150 IQRPGHRIVERRRQRRGHIPRRHRVTRE 177
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 79.0 bits (186), Expect = 8e-14
Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 RGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYV 428
RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+ YV
Sbjct: 68 RGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLEAYV 126
Query: 429 VLGRPGFNVAHRRRKTGKVGFPHRLTKK 512
L RPG+ V RR K KVG HRL K+
Sbjct: 127 TLERPGYRVERRRIKRSKVGSRHRLNKE 154
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +1
Query: 67 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 246
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 247 CTVEELKQKKSLR 285
T+ K K L+
Sbjct: 65 VTLRGEKAYKILK 77
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/92 (46%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +3
Query: 240 CPLYSRGA-KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-KYDPSIGIYG 413
C + R A K + L+ VRE L NF +GN FGI ++ D KYDP IGIYG
Sbjct: 59 CKVTIRDADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYG 118
Query: 414 LDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTK 509
+D VVL RPG V+ RRR+ KVG HR+ K
Sbjct: 119 MDVNVVLERPGHRVSRRRRRGVKVGVEHRVGK 150
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +1
Query: 82 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVEE 261
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R I T+ +
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 262 LKQKKS 279
+ +S
Sbjct: 66 ADKVQS 71
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 76.6 bits (180), Expect = 4e-13
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 431
RG A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GLD +
Sbjct: 68 RGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVCMT 127
Query: 432 LGRPGFNVAHRRRKTGKVGFPHRLT 506
L RPG+ + R + +VG HR+T
Sbjct: 128 LSRPGYGIRKRSKHKARVGRSHRIT 152
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 67 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 246
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+ E I
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 247 CTV 255
T+
Sbjct: 65 VTI 67
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 75.8 bits (178), Expect = 7e-13
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 431
R +A L R L ++ LR ++F+A GN FGI+EHI + G +YDP++GI+G D V
Sbjct: 95 RRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDVAVT 153
Query: 432 LGRPGFNVAHRRRKTGKVGFPHRLTKK 512
L RPGF V +RRR VG HR++++
Sbjct: 154 LARPGFRVQYRRRARADVGKDHRVSRE 180
Score = 59.3 bits (137), Expect = 7e-08
Identities = 26/63 (41%), Positives = 43/63 (68%)
Frame = +1
Query: 67 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 246
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 247 CTV 255
T+
Sbjct: 92 VTL 94
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 72.1 bits (169), Expect = 9e-12
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 431
RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI GL V
Sbjct: 72 RGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGISVT 131
Query: 432 LGRPGFNVAHRRRKTGKVGFPHRLTKK 512
L RPG+ + R + VG H +T +
Sbjct: 132 LTRPGYGIRTRSKHKASVGKSHIITSQ 158
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/67 (35%), Positives = 45/67 (67%)
Frame = +1
Query: 55 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 234
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+ E
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEP 64
Query: 235 IAVHCTV 255
I V T+
Sbjct: 65 IGVAVTI 71
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 72.1 bits (169), Expect = 9e-12
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 431
R AEE L+ L + E L F TGNF FG++EH + +YDPSIGIYGLD V
Sbjct: 77 RDEMAEEFLQTALPLAE--LATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVN 134
Query: 432 LGRPGFNVAHRRRKTGKVGFPHRL 503
L RPG+ VA R + + + HRL
Sbjct: 135 LVRPGYRVAKRDKASRSIPTKHRL 158
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +1
Query: 67 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 246
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 247 CTVEE 261
T+ +
Sbjct: 74 VTLRD 78
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 RGAKAEEILERGL---KVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 422
RG KAEE L+ K L +F GNF FG+ EHID G KYDPS+GIYG+D
Sbjct: 75 RGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGMDI 134
Query: 423 YVVLGRPGFNVAHRRRKTGKVGFPHRLTK 509
V + G+ V R+ K + H +TK
Sbjct: 135 CVTFEKSGYRVKSRKVKRSHIPEKHLVTK 163
Score = 64.1 bits (149), Expect = 2e-09
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR+ I
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPI 68
Query: 238 AVHCTVEELKQKKSLR 285
+ T+ K ++ L+
Sbjct: 69 GLKVTLRGKKAEEFLK 84
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 66.5 bits (155), Expect = 5e-10
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +1
Query: 49 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 228
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKG 62
Query: 229 EKIAVHCTVEE 261
I V T+ +
Sbjct: 63 LNIGVKVTLRK 73
Score = 52.8 bits (121), Expect = 6e-06
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 267 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVL-GR 440
A L+ ++Y++ +F GN FGI ++ D G+KYDP IGI+G+D +V R
Sbjct: 76 ALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIAIVFRRR 135
Query: 441 PGFNVAHRRRKTGKVGFPHRLTKK 512
G+ + RR K + R++K+
Sbjct: 136 GGYRIEKRRIKKMHIPKKMRISKE 159
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = -2
Query: 446 TWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFF 270
TW +V++ ++N++ +VLDTQ++VFL+TE ++T EV Q +F D QT +DFF
Sbjct: 44 TWSTHDNVEIHTVNTDTWVVLDTQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFF 102
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = -1
Query: 297 LSNPSQGFLLL*LLDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTG 118
L Q F L + +DSNLF+++DT+ + SLG L+ +L Q+LG + Q VT
Sbjct: 94 LQTSFQDFFSLWTTNSNVDSNLFVSSDTESSDSVSSLGLNWSLTRQLFQNLGSSGQSVTR 153
Query: 117 FTNTYVQAKLSDMKIPHYI 61
FTN +Q + D++ H +
Sbjct: 154 FTNRNIQDQFLDLQFTHRV 172
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 56.0 bits (129), Expect = 6e-07
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +3
Query: 279 LERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVA 458
L + LK++ + + NFS T FG GI +H++LG +D IGI+G++ L R G+ +
Sbjct: 72 LYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINIIGDLSRRGYRIK 131
Query: 459 HRRRKTGK 482
++ + K
Sbjct: 132 LKKEQDPK 139
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 49.6 bits (113), Expect = 6e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = -1
Query: 237 NLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPHYIF 58
+LF+T + +R H + LG+ RLL+ +LLQHL + +T N V+ +L + PH +
Sbjct: 144 DLFVTANAERAHGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPHRVL 203
Query: 57 RII 49
R++
Sbjct: 204 RLV 206
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = -2
Query: 473 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 294
LTP+V V ++DV++ +++ +VLD +VNVF +TE ++TRG EV +F F
Sbjct: 65 LTPAVDSVAR-ALQHDVEIHTVDPCGRVVLDAEVNVFADTETEVTRGAEVALEEFEFLHL 123
Query: 293 QTPLKD 276
+ L++
Sbjct: 124 EPALQN 129
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 228
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQG 82
Query: 229 EKIAVHCTV 255
++I T+
Sbjct: 83 QEIGCKVTL 91
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/68 (35%), Positives = 42/68 (61%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 237
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ I
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYI 79
Query: 238 AVHCTVEE 261
A T+++
Sbjct: 80 ACKVTLQK 87
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +1
Query: 46 EDNSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFG 216
E N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F
Sbjct: 23 EFNYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFK 82
Query: 217 IRRNEKIAVHCTV 255
IR+ I + T+
Sbjct: 83 IRKGMPIGLKVTL 95
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 43.6 bits (98), Expect = 0.004
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 61 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 231
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGW 83
Query: 232 KIAVHCTV 255
I V T+
Sbjct: 84 PIGVKVTL 91
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 231
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGM 82
Query: 232 KIAVHCTV 255
+ V T+
Sbjct: 83 PVGVMVTL 90
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 42.3 bits (95), Expect = 0.008
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = -2
Query: 473 LTPSVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 294
L P++ E K V+V +I+++ +VLD ++NVF + E +++ GGE QF D
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDA 122
Query: 293 QTPLKD 276
+ L D
Sbjct: 123 EAALDD 128
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 38.7 bits (86), Expect = 0.10
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 61 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 231
+VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 24 SVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGY 83
Query: 232 KIAVHCTV 255
I T+
Sbjct: 84 PIGCKVTL 91
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 37.1 bits (82), Expect = 0.32
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +1
Query: 13 VEER*KGEEGSEDNSKNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVF 183
++E+ + E + N + I+K+ + +CVG++ + K + +TGQ+P
Sbjct: 13 IKEKERQELQKKFGYSNNHQTPRIKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGL 72
Query: 184 SKARYTVRSFGIRRNEKIAVHCTVEELKQKKSLR 285
KA+ ++ +F +R+ IA T+ + + + +R
Sbjct: 73 IKAKKSIAAFKLRKGMPIACKVTLRKKRAEDFIR 106
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 36.7 bits (81), Expect = 0.42
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +3
Query: 273 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 437
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 36.3 bits (80), Expect = 0.56
Identities = 17/68 (25%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 61 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 231
N+ + ++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++
Sbjct: 79 NIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQ 138
Query: 232 KIAVHCTV 255
+ + T+
Sbjct: 139 PLGIAVTL 146
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 35.1 bits (77), Expect = 1.3
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 228
+N M + K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R
Sbjct: 32 RNPMLIPGLEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREG 91
Query: 229 EKIAVHCTV 255
+ I H T+
Sbjct: 92 QPIGCHVTL 100
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 34.7 bits (76), Expect = 1.7
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Frame = +3
Query: 255 RGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYG 413
RG K E L+R + +++++ L F GN+ FGI+EHI + +D I G
Sbjct: 93 RGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVNFDRIDKIRG 152
Query: 414 LDFYVVLGRPGFNVAHRRRKTGKVGFP 494
LD VV+ N H K+ FP
Sbjct: 153 LDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_A7QB06 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 367
Score = 33.5 bits (73), Expect = 3.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 243 PLYSRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDP 395
P++ +GA E +L++GL V +Y LRR F F G + YDP
Sbjct: 68 PIWPKGALTERLLDKGLNVGDYTLRRLLFRTAYYFSNGPFLRFWIRKGYDP 118
>UniRef50_A5AQ20 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1110
Score = 33.5 bits (73), Expect = 3.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 243 PLYSRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDP 395
P++ +GA E +L++GL V +Y LRR F F G + YDP
Sbjct: 727 PIWPKGALTERLLDKGLNVGDYTLRRLLFRTAYYFSNGPFLRFWIRKGYDP 777
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 33.5 bits (73), Expect = 3.9
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNIC----VGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 225
KN+M + + K+ N GE + + A LE +TGQ+P ++ A+ ++ +F +R+
Sbjct: 60 KNIMECVSLNKIVCNTSSKHYAGEK-ESILPAFTALEMITGQKPKYTCAKKSISTFKLRQ 118
Query: 226 NE 231
N+
Sbjct: 119 NQ 120
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 33.5 bits (73), Expect = 3.9
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 228
KN+ + + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 229 EKIAVHCTV 255
+ V T+
Sbjct: 84 MPVGVMVTL 92
>UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 353
Score = 33.1 bits (72), Expect = 5.2
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 309 ELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG--IYGLDFYVVLGRPGFNVAHRRRKTGK 482
E ++D + T + F +++ D+ +YD IG ++G+ G PG +AH R +
Sbjct: 236 EFKKDFPNETLRYSFDAKDYRDIFSEYDLMIGYRVHGIGMCASQGTPGIMIAHDPRASTV 295
Query: 483 VGF 491
GF
Sbjct: 296 KGF 298
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.7 bits (71), Expect = 6.9
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 270 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 392
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 32.7 bits (71), Expect = 6.9
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 231 KDCCPLYSRGAKAEEILERGLKVREYEL 314
K C + +G KA +LE GLKV+EYEL
Sbjct: 117 KIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Gracilaria tenuistipitata var. liui (Red alga)
Length = 179
Score = 32.7 bits (71), Expect = 6.9
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 58 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 228
KN+ + + K+ +N +GE+ + L ++ + +TGQ+P +K++ + F IR N
Sbjct: 24 KNIHQIPKLVKITINRGLGEAANNKQVLEKSMNEIAAITGQKPKITKSKKAIAGFKIREN 83
Query: 229 EKIAVHCTVEELK 267
I + T+ K
Sbjct: 84 IAIGLVVTLRRDK 96
>UniRef50_A0UYZ7 Cluster: FolC bifunctional protein; n=1;
Clostridium cellulolyticum H10|Rep: FolC bifunctional
protein - Clostridium cellulolyticum H10
Length = 424
Score = 32.3 bits (70), Expect = 9.1
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Frame = +3
Query: 246 LYSRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHI-DLGIKYDPSIGIYG--- 413
LY + +AEE++ER K + ++ + +FS + GF + E I D + IG+ G
Sbjct: 197 LYPQEQEAEEVIERVSKEKNAQIHKVDFSTIYDKGFSLSEQIFDYKDYRNIKIGLLGDHQ 256
Query: 414 -------LDFYVVLGRPGFNVAHRRRKTG--KVGFPHRL 503
+D +L GF + HR G K +P RL
Sbjct: 257 MRNAAVAIDTCELLCNKGFALTHRNILDGLEKTRWPGRL 295
>UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Vitis vinifera|Rep:
Chromosome undetermined scaffold_53, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 1341
Score = 32.3 bits (70), Expect = 9.1
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 207 PHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 67
P C+PSL R+++CE L+ T Y+ A + +PH
Sbjct: 1131 PECLPSLKSLRIINCEGLECFPARGLSTPTLTELYISACQNLKSLPH 1177
>UniRef50_Q304D6 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 427
Score = 32.3 bits (70), Expect = 9.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 390 DPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKKM 515
DP GI G+ + V G F +A R+ +GK RL KK+
Sbjct: 160 DPDTGISGISRFSVEGDSSFTLAKRKCSSGKCSTQLRLAKKL 201
>UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;
n=3; cellular organisms|Rep: Mitochondrial 60S ribosomal
protein L5 - Reclinomonas americana
Length = 182
Score = 32.3 bits (70), Expect = 9.1
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +1
Query: 82 IRKLCLNICVGESGD---RLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 252
I K+ +N+ V E+ ++ +LE +TGQ+ + +KA+ ++ +F IR+ I V T
Sbjct: 31 IDKIIVNMGVKEAASDKKQILAPLLILELITGQKAIVTKAKKSISNFKIRKGFPIGVSVT 90
Query: 253 V 255
+
Sbjct: 91 L 91
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 32.3 bits (70), Expect = 9.1
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 294 KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 431
+V+++ + R+ F GN+ FG+QE + + YD + I+G++ VV
Sbjct: 109 RVKDFRGVPRNGFDGRGNYNFGLQEQLIFPEVSYDSVMQIHGMNITVV 156
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,071,376
Number of Sequences: 1657284
Number of extensions: 12509629
Number of successful extensions: 32908
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 31849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32890
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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