Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0052
(603 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal prot... 170 1e-42
BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p pro... 170 1e-42
AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p pro... 170 1e-42
AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA... 170 1e-42
AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p pro... 30 2.8
AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-P... 30 2.8
AF132190-1|AAD34778.1| 1398|Drosophila melanogaster unknown prot... 28 8.5
AE014297-3357|AAN13952.1| 1398|Drosophila melanogaster CG10254-P... 28 8.5
AE014297-3356|AAF56162.1| 1398|Drosophila melanogaster CG10254-P... 28 8.5
>U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal protein
DL11 protein.
Length = 184
Score = 170 bits (413), Expect = 1e-42
Identities = 77/86 (89%), Positives = 83/86 (96%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 80 RGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 139
Query: 435 GRPGFNVAHRRRKTGKVGFPHRLTKK 512
GRPG+NV HR+RK+G VGF HRLTK+
Sbjct: 140 GRPGYNVNHRKRKSGTVGFQHRLTKE 165
Score = 131 bits (316), Expect = 8e-31
Identities = 65/82 (79%), Positives = 71/82 (86%), Gaps = 1/82 (1%)
Frame = +1
Query: 49 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 228
D ++ +LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAQEPDEDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 229 EKIAVHCTVEELKQKKSL-RGV 291
EKIAVHCTV K ++ L RG+
Sbjct: 71 EKIAVHCTVRGAKAEEILERGL 92
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Frame = +2
Query: 476 RKSGISPPPH---KEDAMKWFQQKYDG 547
RKSG H KEDAMKWFQQKYDG
Sbjct: 151 RKSGTVGFQHRLTKEDAMKWFQQKYDG 177
>BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p
protein.
Length = 163
Score = 170 bits (413), Expect = 1e-42
Identities = 77/86 (89%), Positives = 83/86 (96%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 59 RGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 118
Query: 435 GRPGFNVAHRRRKTGKVGFPHRLTKK 512
GRPG+NV HR+RK+G VGF HRLTK+
Sbjct: 119 GRPGYNVNHRKRKSGTVGFQHRLTKE 144
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/34 (67%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = +1
Query: 193 RYTVRSFGIRRNEKIAVHCTVEELKQKKSL-RGV 291
R VRSFGIRRNEKIAVHCTV K ++ L RG+
Sbjct: 38 RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGL 71
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Frame = +2
Query: 476 RKSGISPPPH---KEDAMKWFQQKYDG 547
RKSG H KEDAMKWFQQKYDG
Sbjct: 130 RKSGTVGFQHRLTKEDAMKWFQQKYDG 156
>AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p
protein.
Length = 184
Score = 170 bits (413), Expect = 1e-42
Identities = 77/86 (89%), Positives = 83/86 (96%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 80 RGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 139
Query: 435 GRPGFNVAHRRRKTGKVGFPHRLTKK 512
GRPG+NV HR+RK+G VGF HRLTK+
Sbjct: 140 GRPGYNVNHRKRKSGTVGFQHRLTKE 165
Score = 140 bits (339), Expect = 1e-33
Identities = 69/82 (84%), Positives = 74/82 (90%), Gaps = 1/82 (1%)
Frame = +1
Query: 49 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 228
D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 229 EKIAVHCTVEELKQKKSL-RGV 291
EKIAVHCTV K ++ L RG+
Sbjct: 71 EKIAVHCTVRGAKAEEILERGL 92
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Frame = +2
Query: 476 RKSGISPPPH---KEDAMKWFQQKYDG 547
RKSG H KEDAMKWFQQKYDG
Sbjct: 151 RKSGTVGFQHRLTKEDAMKWFQQKYDG 177
>AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA
protein.
Length = 184
Score = 170 bits (413), Expect = 1e-42
Identities = 77/86 (89%), Positives = 83/86 (96%)
Frame = +3
Query: 255 RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 434
RGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL
Sbjct: 80 RGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 139
Query: 435 GRPGFNVAHRRRKTGKVGFPHRLTKK 512
GRPG+NV HR+RK+G VGF HRLTK+
Sbjct: 140 GRPGYNVNHRKRKSGTVGFQHRLTKE 165
Score = 140 bits (339), Expect = 1e-33
Identities = 69/82 (84%), Positives = 74/82 (90%), Gaps = 1/82 (1%)
Frame = +1
Query: 49 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 228
D +KN MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN
Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 70
Query: 229 EKIAVHCTVEELKQKKSL-RGV 291
EKIAVHCTV K ++ L RG+
Sbjct: 71 EKIAVHCTVRGAKAEEILERGL 92
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Frame = +2
Query: 476 RKSGISPPPH---KEDAMKWFQQKYDG 547
RKSG H KEDAMKWFQQKYDG
Sbjct: 151 RKSGTVGFQHRLTKEDAMKWFQQKYDG 177
>AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p
protein.
Length = 2171
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 162 ELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPHYI 61
ELL HLG Q GF T ++ L + +PHY+
Sbjct: 626 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHYM 658
>AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-PA
protein.
Length = 2599
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 162 ELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPHYI 61
ELL HLG Q GF T ++ L + +PHY+
Sbjct: 1054 ELLWHLGRDKQTARGFEKTLLKV-LDTLALPHYM 1086
>AF132190-1|AAD34778.1| 1398|Drosophila melanogaster unknown
protein.
Length = 1398
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 31 GEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL 162
G +GSED+ + N HI + + DR T A KVLE++
Sbjct: 722 GSDGSEDSWETESENSHISSSDNDDDILTGIDRATEAMKVLEKM 765
>AE014297-3357|AAN13952.1| 1398|Drosophila melanogaster CG10254-PB,
isoform B protein.
Length = 1398
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 31 GEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL 162
G +GSED+ + N HI + + DR T A KVLE++
Sbjct: 722 GSDGSEDSWETESENSHISSSDNDDDILTGIDRATEAMKVLEKM 765
>AE014297-3356|AAF56162.1| 1398|Drosophila melanogaster CG10254-PA,
isoform A protein.
Length = 1398
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 31 GEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL 162
G +GSED+ + N HI + + DR T A KVLE++
Sbjct: 722 GSDGSEDSWETESENSHISSSDNDDDILTGIDRATEAMKVLEKM 765
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,767,327
Number of Sequences: 53049
Number of extensions: 581175
Number of successful extensions: 1631
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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