Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0051
(688 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 91 4e-20
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 54 4e-09
Z69980-1|CAA93820.1| 134|Anopheles gambiae GTP-binding protein ... 27 0.42
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 25 2.2
AY045760-3|AAK84944.1| 168|Anopheles gambiae D7-related 2 prote... 25 2.2
AJ133853-1|CAB39728.1| 168|Anopheles gambiae D7-related 2 prote... 25 2.2
AJ000036-1|CAA03872.1| 150|Anopheles gambiae D7r2 protein protein. 25 2.2
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 6.8
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 9.0
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 90.6 bits (215), Expect = 4e-20
Identities = 36/85 (42%), Positives = 59/85 (69%)
Frame = +1
Query: 1 GIDXLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSK 180
G L++T+ ++D TV+ ++WDTAGQER+ SL P Y R + A+VVYDI N++SF +
Sbjct: 58 GAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKT 117
Query: 181 WIDDVRTERGSDVIIMLVGNKTDLS 255
W+ +++ + +++I L GNK DL+
Sbjct: 118 WVKELQRQASPNIVIALAGNKADLA 142
Score = 37.5 bits (83), Expect = 4e-04
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 255 DKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMHEV 434
+ R V EE + A + ++F+ETSAK NV +F +A LP + A P ++
Sbjct: 143 NSRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKLPKNEGA--GPQQN---- 196
Query: 435 ILRQSPGDNKEQDSSC 482
+R + + Q+S C
Sbjct: 197 -IRPTQNETNRQNSGC 211
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 54.0 bits (124), Expect = 4e-09
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 DXLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ-TSKW 183
D S M ++ V L LWDTAGQE + L P + V ++ Y + + +SF TSKW
Sbjct: 41 DNYSAPMVVDGVQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKW 100
Query: 184 IDDVRTERGSDVIIMLVGNKTDL 252
+++ D I+LVG K DL
Sbjct: 101 YPEIK-HHCPDAPIILVGTKIDL 122
>Z69980-1|CAA93820.1| 134|Anopheles gambiae GTP-binding protein
protein.
Length = 134
Score = 27.5 bits (58), Expect = 0.42
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 258 KRQVSTEEGDKKAKELN-VMFIETSAKAGYNVKQLF 362
++ ++ E+G+K AKEL V ++E SA +K +F
Sbjct: 77 QKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVF 112
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 25.0 bits (52), Expect = 2.2
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 320 RDKRQSWLQC---*TVIPKSSCCPAWHGLCRKQTSRRHARGDLE 442
RD+R+ W+QC T I + C +++ + R+ ++ R L+
Sbjct: 217 RDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLD 260
>AY045760-3|AAK84944.1| 168|Anopheles gambiae D7-related 2 protein
protein.
Length = 168
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 264 QVSTEEGDKKAKELNVMFIETSAKAGY 344
+ ST DKKA F+ TS+ AG+
Sbjct: 104 EASTSGSDKKANTFYTCFLGTSSLAGF 130
>AJ133853-1|CAB39728.1| 168|Anopheles gambiae D7-related 2 protein
protein.
Length = 168
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 264 QVSTEEGDKKAKELNVMFIETSAKAGY 344
+ ST DKKA F+ TS+ AG+
Sbjct: 104 EASTSGSDKKANTFYTCFLGTSSLAGF 130
>AJ000036-1|CAA03872.1| 150|Anopheles gambiae D7r2 protein protein.
Length = 150
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 264 QVSTEEGDKKAKELNVMFIETSAKAGY 344
+ ST DKKA F+ TS+ AG+
Sbjct: 104 EASTSGSDKKANTFYTCFLGTSSLAGF 130
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 6.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 177 EMDRRRSHGAWF*RHHHVGRQQDRSLDKRQVSTE 278
E+DR RSH R + R +++ ++RQ+ ++
Sbjct: 293 EIDRLRSHFYGMQRRFNRARTEEQREERRQIKSD 326
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.0 bits (47), Expect = 9.0
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 404 KQTSRRHARGDLETIARRQQGAGQQLCLLDAATEATSASPAGD 532
K+ ++ RGD + + +QQ LD T+A P D
Sbjct: 385 KERTKAKNRGDFQKLREKQQIEEDLRGYLDWITQAEDIDPDND 427
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,408
Number of Sequences: 2352
Number of extensions: 15040
Number of successful extensions: 45
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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