Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0050
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.6  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 229 CHQIYQIDHRYFHRFQLNLKHPNPLVQTVDFCFSFWV 119
           C  + ++  +    FQ+ LKH  P  Q  D+  S W+
Sbjct: 236 CDVVGKVASQLAEDFQMALKHVGPSSQVADY-RSLWM 271


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 351 KNIKKDRRRQNKMMRDLWPEDEVF 422
           K +KK+  +  + +R +W  D+VF
Sbjct: 88  KRLKKEYPKIWEQLRAVWDPDDVF 111


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 85   KSVLDFRLQLLILLWVKFLLNLNRD 11
            KSV  F +   + + V FLL LN+D
Sbjct: 1267 KSVFAFFMFNALFVLVVFLLQLNKD 1291


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 85   KSVLDFRLQLLILLWVKFLLNLNRD 11
            KSV  F +   + + V FLL LN+D
Sbjct: 1267 KSVFAFFMFNALFVLVVFLLQLNKD 1291


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 64  LQLLILLWVKFLLN 23
           L  +ILLW+ F LN
Sbjct: 138 LFFVILLWISFFLN 151


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/63 (20%), Positives = 33/63 (52%)
 Frame = +3

Query: 228 QKEAE*T*ANKHRDGRDGDEYDEMFDVISLDALTRKSDTGNKNIKKDRRRQNKMMRDLWP 407
           +KE     A + +   +G++ D+  D   ++ +    D   ++ KK+ +++ K +++ + 
Sbjct: 220 EKELSDDEAEEEKKEEEGEDKDK--DKPKIEDVGEDED---EDTKKEDKKKKKTIKEKYT 274

Query: 408 EDE 416
           EDE
Sbjct: 275 EDE 277


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 317 KRNDIKHFIILIAVSTVTMFV 255
           +R  +K+F ILI  + V MF+
Sbjct: 118 ERKVMKNFAILIIPTCVAMFI 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,040
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)