Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0050
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.2  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   9.2  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 324 KHQAK*HQTFHHTH 283
           +HQ   HQT HH H
Sbjct: 274 QHQQPTHQTHHHHH 287


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 324 KHQAK*HQTFHHTH 283
           +HQ   HQT HH H
Sbjct: 274 QHQQPTHQTHHHHH 287


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 324 KHQAK*HQTFHHTH 283
           +HQ   HQT HH H
Sbjct: 226 QHQQPTHQTHHHHH 239


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 354  NIKKDRRRQNKMMRDLWPEDEV 419
            +I++  R+  K+++ LW EDE+
Sbjct: 1004 SIQEAARKITKVLQQLWREDEL 1025


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = +2

Query: 5   TRVSIQVQKKFHPQKNQ*LQTKVEDTFIILVLIMKALPYPKRKTEIHS 148
           T  S++ Q+  HP K Q  +         L++  +   Y K +  +H+
Sbjct: 88  TSASMECQETSHPIKEQGFEVSASKLQEALMVARELHTYTKDRNNVHA 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,437
Number of Sequences: 2352
Number of extensions: 11337
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)