Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0050
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063894-1|AAH63894.1|  816|Homo sapiens DENND2C protein protein.      30   9.1  
AL133382-2|CAI19301.1|  871|Homo sapiens DENN/MADD domain contai...    30   9.1  
AL133382-1|CAM27633.1|  928|Homo sapiens DENN/MADD domain contai...    30   9.1  

>BC063894-1|AAH63894.1|  816|Homo sapiens DENND2C protein protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +1

Query: 22  SSEEISPTKESITADESRGHFYNFGSHYEGLTLPKKKNRNPQFALEDLDVLDLTE 186
           + +E+ PTK   + +ES   +     H     L     RNP +   + D+++L E
Sbjct: 433 TGKELPPTKGETSGNESDAEYLPKNRHKRLAQLQPSSKRNPHYQTLERDLIELQE 487


>AL133382-2|CAI19301.1|  871|Homo sapiens DENN/MADD domain
           containing 2C protein.
          Length = 871

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +1

Query: 22  SSEEISPTKESITADESRGHFYNFGSHYEGLTLPKKKNRNPQFALEDLDVLDLTE 186
           + +E+ PTK   + +ES   +     H     L     RNP +   + D+++L E
Sbjct: 376 TGKELPPTKGETSGNESDAEYLPKNRHKRLAQLQPSSKRNPHYQTLERDLIELQE 430


>AL133382-1|CAM27633.1|  928|Homo sapiens DENN/MADD domain
           containing 2C protein.
          Length = 928

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +1

Query: 22  SSEEISPTKESITADESRGHFYNFGSHYEGLTLPKKKNRNPQFALEDLDVLDLTE 186
           + +E+ PTK   + +ES   +     H     L     RNP +   + D+++L E
Sbjct: 433 TGKELPPTKGETSGNESDAEYLPKNRHKRLAQLQPSSKRNPHYQTLERDLIELQE 487


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,611,931
Number of Sequences: 237096
Number of extensions: 1469893
Number of successful extensions: 10139
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10139
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)