Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0048
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   8.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.7  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 476 SLSLSLQIGEVFFGNDI 526
           +L +SL IG ++FG D+
Sbjct: 422 TLIISLVIGAIYFGQDL 438


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 476 SLSLSLQIGEVFFGNDI 526
           +L +SL IG ++FG D+
Sbjct: 422 TLIISLVIGAIYFGQDL 438


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 191 HRWRCIKNKILYTYVLKYVGTEH 123
           HRWR I N + +   ++  G E+
Sbjct: 381 HRWRQIFNMVGFRNAVQETGIEN 403


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 357 MSKYIISKILSLVNNCKSL 301
           MS   +  ILS+VN C  +
Sbjct: 320 MSAAAVEHILSIVNTCSQI 338


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 333 ILSLVNNCKSLC 298
           +LS+V NC S C
Sbjct: 276 VLSIVKNCLSYC 287


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 333 ILSLVNNCKSLC 298
           +LS+V NC S C
Sbjct: 276 VLSIVKNCLSYC 287


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 249 IPN*NSLQEVSYTR 208
           IP  N LQE+ YT+
Sbjct: 35  IPTYNDLQELKYTK 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,130
Number of Sequences: 336
Number of extensions: 2835
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)