Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0046
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.56 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.0  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   6.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.1  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
 Frame = -3

Query: 380  VAVGRCYTYV-SRAISTSSICD---E*Y-AHVNIR-TDC*TILLRLFDQVAFVLPVAPKT 219
            V V RC T V +R I     CD   E Y A V +R T+   I+ RLF   + V P+A K 
Sbjct: 1030 VQVPRCVTIVGARNIQIHGFCDASEEGYGACVYVRSTNGEEIVSRLFVSKSKVTPLATKH 1089

Query: 218  IVSKLRL 198
             +++L L
Sbjct: 1090 TIARLEL 1096


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 634 PFKPSLGLSTNNSLPKISQ 690
           P  PSLGLS    LP++ Q
Sbjct: 582 PLHPSLGLSMGLGLPQVPQ 600


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 92  GRANRPFFFFIALVDRRAYGPPDGEW 15
           GR   P +    +V RR YG P   W
Sbjct: 159 GRVGCPHYMAPEVVARRVYGKPCDVW 184


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 592 LLFLF-NSEYFHIYLPFKPSLGLSTNNSLPKISQI 693
           LL +F N     +Y PF  S   STN +L KI  I
Sbjct: 120 LLTIFANCVALAVYTPFPNSDSNSTNAALEKIEYI 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,594
Number of Sequences: 2352
Number of extensions: 12649
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)