Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0045
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   1.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.0  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 409 LIVLIFT*FLNIVFLLKVKAKYYNNFFLEDFVTSNISPS-VICDH 278
           +++ +F+ FL +  L K  AK      +EDF +  I P  V+ DH
Sbjct: 221 VVIDVFSKFLKLYPLRKATAKIAAKRLIEDF-SGYIKPKCVLSDH 264


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -1

Query: 122 LSLSKIINILNKIYSKNINHLKYKIILKSTFKVKCKN 12
           LS+  +++I +K + +N  H+K  ++      + C N
Sbjct: 43  LSIGVVVSIYSKSFHRNEIHIKIVLMFFKEASLYCFN 79


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 199 DYCIFSD*ENLMYNYLLEPQYVTN 128
           D C  +  + + + Y L+ Q+VTN
Sbjct: 299 DACTIASKQTISWCYKLQEQFVTN 322


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 199 DYCIFSD*ENLMYNYLLEPQYVTN 128
           D C  +  + + + Y L+ Q+VTN
Sbjct: 299 DACTIASKQTISWCYKLQEQFVTN 322


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -2

Query: 172 NLMYNYLLEPQYVTNIIYLC 113
           +L+Y +L+   Y  ++ Y+C
Sbjct: 631 HLLYIFLVGIMYAADVFYIC 650


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,407
Number of Sequences: 336
Number of extensions: 2888
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)