Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0045
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.23 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    28   0.23 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    28   0.23 
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   5.0  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     24   5.0  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     24   5.0  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 225 ISYLLTSHYRQQSYILKTWSQITDGEI 305
           +SYL    Y  ++ ++  WS + DGEI
Sbjct: 613 LSYLSWFRYANEALLINQWSTVVDGEI 639


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 225 ISYLLTSHYRQQSYILKTWSQITDGEI 305
           +SYL    Y  ++ ++  WS + DGEI
Sbjct: 613 LSYLSWFRYANEALLINQWSTVVDGEI 639


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 225 ISYLLTSHYRQQSYILKTWSQITDGEI 305
           +SYL    Y  ++ ++  WS + DGEI
Sbjct: 591 LSYLSWFRYANEALLINQWSTVVDGEI 617


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 346 YYNNFFLEDFVTSN 305
           YYNNF+ E+++  N
Sbjct: 212 YYNNFYTEEYLNYN 225


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 346 YYNNFFLEDFVTSN 305
           YYNNF+ E+++  N
Sbjct: 212 YYNNFYTEEYLNYN 225


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 346 YYNNFFLEDFVTSN 305
           YYNNF+ E+++  N
Sbjct: 212 YYNNFYTEEYLNYN 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,944
Number of Sequences: 2352
Number of extensions: 10428
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)