Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0045
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094890-1|AAM11243.1|  517|Drosophila melanogaster RE59303p pro...    43   3e-04
AY060872-1|AAL28420.1|  390|Drosophila melanogaster GM03781p pro...    43   3e-04
AE014134-1581|AAF52726.1|  517|Drosophila melanogaster CG31886-P...    43   3e-04
AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA...    33   0.36 

>AY094890-1|AAM11243.1|  517|Drosophila melanogaster RE59303p
           protein.
          Length = 517

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = -3

Query: 645 FLVTNLLL*KCPTKGGLRNDEDDTSVLISVGLPRKSVYIFFPIAVL 508
           FL   +++ + PT+ G+ ++EDD + LIS   PR  +Y  FPI VL
Sbjct: 463 FLSDEIVVVEVPTRDGIEHEEDDITNLISTCHPRSEIYAIFPITVL 508


>AY060872-1|AAL28420.1|  390|Drosophila melanogaster GM03781p
           protein.
          Length = 390

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = -3

Query: 645 FLVTNLLL*KCPTKGGLRNDEDDTSVLISVGLPRKSVYIFFPIAVL 508
           FL   +++ + PT+ G+ ++EDD + LIS   PR  +Y  FPI VL
Sbjct: 336 FLSDEIVVVEVPTRDGIEHEEDDITNLISTCHPRSEIYAIFPITVL 381


>AE014134-1581|AAF52726.1|  517|Drosophila melanogaster CG31886-PA
           protein.
          Length = 517

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = -3

Query: 645 FLVTNLLL*KCPTKGGLRNDEDDTSVLISVGLPRKSVYIFFPIAVL 508
           FL   +++ + PT+ G+ ++EDD + LIS   PR  +Y  FPI VL
Sbjct: 463 FLSDEIVVVEVPTRDGIEHEEDDITNLISTCHPRSEIYAIFPITVL 508


>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
            protein.
          Length = 3396

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 431  NIHCNYCHMKHSFNYVS*KCKK*YQKRTAMGKNM*T-DFLGRPTEIRTDVSSSSFRNPPF 607
            N    +C  + +F YVS    + Y+ +  + K + T D +GRPTEIR     +   N  +
Sbjct: 1168 NSATGWCGKQEAFTYVSVDLGQIYRVKAILVKGVVTNDIVGRPTEIRFFYKQAESEN--Y 1225

Query: 608  VGHFYNNKFVTKKP 649
            V +F N     + P
Sbjct: 1226 VVYFPNFNLTMRDP 1239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,475,901
Number of Sequences: 53049
Number of extensions: 436671
Number of successful extensions: 1494
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)