Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0044
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   9.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   9.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 330  FLHNGLVDFCRLSFLFGKLFLQLFCS 253
            F++N  VD  +LSF +      LFCS
Sbjct: 1602 FVYNTSVDDSKLSFSWNGQEFNLFCS 1627


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 151 HRLVSKFTGLREKLRQ 198
           +RL+ K+TGLR  +R+
Sbjct: 706 YRLLKKYTGLRNLIRE 721


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 151 HRLVSKFTGLREKLRQ 198
           +RL+ K+TGLR  +R+
Sbjct: 706 YRLLKKYTGLRNLIRE 721


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,319
Number of Sequences: 2352
Number of extensions: 11693
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)