Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0044
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X94910-1|CAA64397.1|  261|Homo sapiens ERp28 protein.                  50   1e-05
CR541667-1|CAG46468.1|  261|Homo sapiens C12orf8 protein.              50   1e-05
BC101495-1|AAI01496.1|  261|Homo sapiens endoplasmic reticulum p...    50   1e-05
BC101493-1|AAI01494.1|  261|Homo sapiens endoplasmic reticulum p...    50   1e-05
AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    33   1.3  

>X94910-1|CAA64397.1|  261|Homo sapiens ERp28 protein.
          Length = 261

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = +2

Query: 14  LAKKYGATKDNFPVVRLFXKGK-NDPIPFDDSQGFTTDELRRFVRENTGLYLSLPGCVRN 190
           L++KY   K+++PV  LF  G   +P+P+  +       ++R+++   G+YL +PGC+  
Sbjct: 104 LSEKYKLDKESYPVFYLFRDGDFENPVPYTGA--VKVGAIQRWLK-GQGVYLGMPGCLPV 160

Query: 191 LDKLAIKFMKAKG-ENRKKVLKE 256
            D LA +F++A G E R+ +LK+
Sbjct: 161 YDALAGEFIRASGVEARQALLKQ 183


>CR541667-1|CAG46468.1|  261|Homo sapiens C12orf8 protein.
          Length = 261

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = +2

Query: 14  LAKKYGATKDNFPVVRLFXKGK-NDPIPFDDSQGFTTDELRRFVRENTGLYLSLPGCVRN 190
           L++KY   K+++PV  LF  G   +P+P+  +       ++R+++   G+YL +PGC+  
Sbjct: 104 LSEKYKLDKESYPVFYLFRDGDFENPVPYTGA--VKVGAIQRWLK-GQGVYLGMPGCLPV 160

Query: 191 LDKLAIKFMKAKG-ENRKKVLKE 256
            D LA +F++A G E R+ +LK+
Sbjct: 161 YDALAGEFIRASGVEARQALLKQ 183


>BC101495-1|AAI01496.1|  261|Homo sapiens endoplasmic reticulum
           protein 29 protein.
          Length = 261

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = +2

Query: 14  LAKKYGATKDNFPVVRLFXKGK-NDPIPFDDSQGFTTDELRRFVRENTGLYLSLPGCVRN 190
           L++KY   K+++PV  LF  G   +P+P+  +       ++R+++   G+YL +PGC+  
Sbjct: 104 LSEKYKLDKESYPVFYLFRDGDFENPVPYTGA--VKVGAIQRWLK-GQGVYLGMPGCLPV 160

Query: 191 LDKLAIKFMKAKG-ENRKKVLKE 256
            D LA +F++A G E R+ +LK+
Sbjct: 161 YDALAGEFIRASGVEARQALLKQ 183


>BC101493-1|AAI01494.1|  261|Homo sapiens endoplasmic reticulum
           protein 29, isoform 1 precursor protein.
          Length = 261

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = +2

Query: 14  LAKKYGATKDNFPVVRLFXKGK-NDPIPFDDSQGFTTDELRRFVRENTGLYLSLPGCVRN 190
           L++KY   K+++PV  LF  G   +P+P+  +       ++R+++   G+YL +PGC+  
Sbjct: 104 LSEKYKLDKESYPVFYLFRDGDFENPVPYTGA--VKVGAIQRWLK-GQGVYLGMPGCLPV 160

Query: 191 LDKLAIKFMKAKG-ENRKKVLKE 256
            D LA +F++A G E R+ +LK+
Sbjct: 161 YDALAGEFIRASGVEARQALLKQ 183


>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 21/72 (29%), Positives = 35/72 (48%)
 Frame = +2

Query: 209 KFMKAKGENRKKVLKEQKSCRKSFPKRKLSLQKSTRPLWRK*LKKAINLSIQNMRESRKF 388
           K  K K + +KK  K++K  +K   K+K   +K  +   +K  KK      +N ++ +K 
Sbjct: 14  KKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKK 73

Query: 389 SVAKFLMRRKKK 424
              K   +RKKK
Sbjct: 74  KKKKKKKKRKKK 85



 Score = 30.3 bits (65), Expect = 6.9
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +2

Query: 209 KFMKAKGENRKKVLKEQKSCRKSFPKRKLSLQKSTRPLWRK*LKKAINLSIQNMRESRKF 388
           K  K K + RKK  K++K  +K   K+K   +K  +   +K  KK      +  ++ +K 
Sbjct: 7   KKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKN 66

Query: 389 SVAKFLMRRKKK 424
              K   ++KKK
Sbjct: 67  KKKKKKKKKKKK 78



 Score = 30.3 bits (65), Expect = 6.9
 Identities = 19/72 (26%), Positives = 35/72 (48%)
 Frame = +2

Query: 209 KFMKAKGENRKKVLKEQKSCRKSFPKRKLSLQKSTRPLWRK*LKKAINLSIQNMRESRKF 388
           K  K K + +KK  K++K  +K   K+K   +K  +   +K  KK  N   +  ++ +K 
Sbjct: 19  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 78

Query: 389 SVAKFLMRRKKK 424
              +   ++KKK
Sbjct: 79  KKKRKKKKKKKK 90



 Score = 30.3 bits (65), Expect = 6.9
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +2

Query: 209 KFMKAKGENRKKVLKEQKSCRKSFPKRKLSLQKSTRPLWRK*LKKAINLSIQNMRESRKF 388
           K  K K + +KK  K++K  +K   K+K   +K  +   +K  KK      +  ++ RK 
Sbjct: 25  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKK 84

Query: 389 SVAKFLMRRKKK 424
              K   RRK++
Sbjct: 85  KKKKKKKRRKRR 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,441,456
Number of Sequences: 237096
Number of extensions: 1516728
Number of successful extensions: 3432
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3255
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)