Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0043
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.4  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   3.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.5  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   9.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 438 LYRHIVLSRYSLKTSVV*IGAKILTCISKSKFNLLNIYV 322
           LYR IVL   S  + V+ I       + K KF ++N Y+
Sbjct: 164 LYRWIVLYTLSKMSQVMLIQFCAFVVVLKQKFCVVNQYI 202


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 238 HNLAGTFYQCQFFLTFL 188
           H LA TF+   +FLT +
Sbjct: 226 HTLANTFWSALYFLTII 242


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 269 FQRQ*QLYCFLYYFQLHTT*MLRR 340
           F ++  LYCF YY  + TT   RR
Sbjct: 69  FFKEASLYCFNYYVIVVTTFYKRR 92


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 357 KCRLEFWRQFKQRMFSKSIYLKQY 428
           K + E+W Q +++   + IY K+Y
Sbjct: 90  KQKPEWWEQLQKKFDPQGIYKKRY 113


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 56  LHYLSFFYDNIILFVAFCFFFLSW 127
           L+YL  F  N++  +  C+    W
Sbjct: 99  LYYLLLFVINVLYVLTLCYAVYYW 122


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 571 VILHKSK*KYRIKFRHFYTIYKKEYKVVSHIYYFSSNNI 455
           V  HK K    I  +H +TI    +K     +   +N+I
Sbjct: 72  VSFHKLKLTNNISDKHGFTILNSMHKYQPRFHLVRANDI 110


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 437 CTGILF*VDTL*KHPLFKLAPKF*PAFLNLNL 342
           C  +L+ +     H   K+ P+F    LN+NL
Sbjct: 322 CMTLLYIICNEGHHATRKMGPEFRERLLNVNL 353


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 437 CTGILF*VDTL*KHPLFKLAPKF*PAFLNLNL 342
           C  +L+ +     H   K+ P+F    LN+NL
Sbjct: 322 CMTLLYIICNEGHHATRKMGPEFRERLLNVNL 353


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 528 LNFILYFYFDLCNI 569
           L+F+ YF F LC+I
Sbjct: 392 LSFVDYFVFLLCSI 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,386
Number of Sequences: 336
Number of extensions: 3048
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)