Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0042
(696 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 126 2e-29
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 70 2e-12
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 69 5e-12
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 67 1e-11
10_08_0620 - 19321612-19323237 66 2e-11
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 66 3e-11
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 65 4e-11
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 64 1e-10
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 62 5e-10
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 61 7e-10
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 53 3e-07
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 38 0.010
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 37 0.018
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 36 0.031
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 36 0.041
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 35 0.054
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 33 0.22
06_03_0769 + 24448483-24448825,24449228-24449305,24450812-244508... 33 0.29
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 32 0.50
04_04_0185 - 23403479-23403868,23404018-23404023 30 2.0
02_05_1217 + 34999631-34999945,35000670-35000835,35001908-350020... 29 3.5
02_04_0554 - 23831212-23832163,23833173-23833438,23833694-238337... 28 6.2
10_08_1046 + 22542074-22544749,22544837-22545544 28 8.1
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 28 8.1
08_02_1449 - 27174451-27178005 28 8.1
04_03_0984 - 21432119-21432157,21432722-21434068 28 8.1
02_04_0488 + 23397480-23397687,23397777-23397805,23398462-233985... 28 8.1
02_04_0485 + 23338980-23339187,23339277-23339305,23339962-233400... 28 8.1
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 126 bits (303), Expect = 2e-29
Identities = 59/81 (72%), Positives = 68/81 (83%)
Frame = +1
Query: 25 SSKMQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVI 204
+S MQPQI+LL+EGTD +QG+ Q+VSNINAC +V D VRTTLGPRGMDKLI D G I
Sbjct: 2 ASMMQPQIILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTI 61
Query: 205 SNDGATIMKLLDIIHPALKLL 267
SNDGATIM+LLDIIHPA K+L
Sbjct: 62 SNDGATIMRLLDIIHPAAKIL 82
Score = 120 bits (289), Expect = 1e-27
Identities = 56/87 (64%), Positives = 70/87 (80%)
Frame = +3
Query: 249 PCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 428
P AK LVDIAKSQD+EVGDGTT+VV+LA E LK KP++E+GVHP LIR+ RTA LAI
Sbjct: 77 PAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAI 136
Query: 429 EKIKEQAVKIDNKSPEEQRDLLLKCAS 509
EK+K+ A I+ KS EE+++LL KCA+
Sbjct: 137 EKVKDLATSIEGKSLEEKKELLAKCAA 163
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 509 TAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFPGFPEWAFKK 688
T +SSKLI +K+ F+ +VVDAVL++ L+++GIKKVPGG + DSF AFKK
Sbjct: 164 TTLSSKLIGGEKEFFASMVVDAVLAISNDDR-LNLLGIKKVPGGTMRDSFL-VNGVAFKK 221
Query: 689 TF 694
TF
Sbjct: 222 TF 223
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = +3
Query: 246 SPCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLA 425
+P AK LVDI+K QD EVGDGTTSVV+LAGE+L+ + V +HP +I R A A
Sbjct: 71 NPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECA 130
Query: 426 IEKIKEQAVKIDNK 467
+ E+ +DNK
Sbjct: 131 RNALLERT--MDNK 142
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +1
Query: 52 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVD-HNGKAV-ISNDGATI 225
+L++ + +G+ ++ + D V+TTLGP+GMDK++ G++V ++NDGATI
Sbjct: 4 VLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 63
Query: 226 MKLLDIIHPALKLL 267
+K L I +PA K+L
Sbjct: 64 LKSLHIDNPAAKVL 77
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +2
Query: 494 IEVCITAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSF 658
+ + +T +SSK++ Q K++F+++ VDAVL L L+ I I K+PGG+L+DSF
Sbjct: 153 MNIAMTTLSSKILSQDKEYFAELAVDAVLRLKGS-TNLEAIQILKIPGGSLKDSF 206
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/71 (40%), Positives = 50/71 (70%)
Frame = +3
Query: 249 PCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 428
P AK++++++++QD EVGDGTTSV++LAGE+L + F+++ HP V+ RA A A+
Sbjct: 75 PAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDAL 134
Query: 429 EKIKEQAVKID 461
+ + A+ +D
Sbjct: 135 SVLDKIAIPVD 145
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +1
Query: 46 ILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATI 225
+L+L++ + G +NI A + V D +RTTLGP+ M K+++D G V++NDG I
Sbjct: 7 VLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCI 66
Query: 226 MKLLDIIHPALK 261
++ LD+ HPA K
Sbjct: 67 LRELDLAHPAAK 78
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/71 (40%), Positives = 50/71 (70%)
Frame = +3
Query: 249 PCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 428
P AK++++++++QD EVGDGTTSV++LAGE+L + F+++ HP V+ RA A A+
Sbjct: 75 PAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDAL 134
Query: 429 EKIKEQAVKID 461
+ + A+ +D
Sbjct: 135 AVLDKIAMHVD 145
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/72 (41%), Positives = 47/72 (65%)
Frame = +1
Query: 46 ILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATI 225
+L+L++ + G +NI A + V D +RTTLGPR M K+++D +G V++NDG I
Sbjct: 7 VLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAI 66
Query: 226 MKLLDIIHPALK 261
++ +DI HPA K
Sbjct: 67 LREIDIAHPAAK 78
>10_08_0620 - 19321612-19323237
Length = 541
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +3
Query: 249 PCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 428
P A+ L D+++SQDA GDGTT+VV+LAG +L+R + + G HP A+ + A+
Sbjct: 84 PAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAV 143
Query: 429 EKIKEQAVKIDNKSPEEQRDLLLKCAS 509
E + A+ ++ RD L+K AS
Sbjct: 144 EVLHGMAIPVE----LSDRDALVKSAS 166
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Frame = +1
Query: 103 NINACQLVVDAVRTTLGPRGMDKLIVDHNG----KAVISNDGATIMKLLDIIHPALKLL 267
NI A + V A RT+LGPRGMDK+I + +I+NDGATI+ + ++ PA ++L
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARML 89
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 52 LLREGTDQTQGKPQLV-SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 228
+L+EG G + V NI+AC+ + RT+LGP GM+K++++H K ++ND ATI+
Sbjct: 9 MLKEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 68
Query: 229 KLLDIIHPALKLL 267
L++ HPA K+L
Sbjct: 69 NELEVQHPAAKIL 81
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 249 PCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 428
P AK LV ++Q E+GDG + AGE+L++ + + G+HP +I A +
Sbjct: 76 PAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTV 135
Query: 429 EKIKEQAVK-IDNKSPEEQRDLLL 497
E +++ K +N + +++L
Sbjct: 136 EILEDLVEKGSENMDVRNKEEVVL 159
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +3
Query: 249 PCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 428
P A+ L ++++SQDA GDGTT+VV+LAG +L+R + + G HP A+ + A+
Sbjct: 80 PAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAV 139
Query: 429 EKIKEQAVKIDNKSPEEQRDLLLKCAS 509
E + A+ I+ RD L+K AS
Sbjct: 140 EVLHAMAIPIE----LSDRDSLVKSAS 162
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = +1
Query: 103 NINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHPALKLL 267
NI A + V DAVRT+LGPRGMDK+I + +I+NDGATI+ + ++ PA ++L
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARML 85
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +3
Query: 246 SPCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLI 395
+P AK LVDI+K QD EVGDGTTSVV+LAGE+L+ + V +HP +I
Sbjct: 72 NPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTII 121
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Frame = +1
Query: 52 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVD-HNGKAV-ISNDGATI 225
LL++ + +G+ +++ + D V+TTLGP+GMDK++ G++V ++NDGATI
Sbjct: 5 LLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 64
Query: 226 MKLLDIIHPALKLL 267
+K L I +PA K+L
Sbjct: 65 LKSLHIDNPAAKVL 78
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +2
Query: 494 IEVCITAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSF 658
+ + +T +SSK++ Q K++F+ + VDAVL L L+ I I K GG+L+DSF
Sbjct: 130 MNIAMTTLSSKILSQDKEYFAGLAVDAVLRLKGS-TNLEAIQILKKTGGSLKDSF 183
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/69 (37%), Positives = 46/69 (66%)
Frame = +3
Query: 255 AKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEK 434
AK +V+++ SQD E+GDGTT VV++AG +L++ + +E G+HP + ASR+A +
Sbjct: 84 AKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDH 143
Query: 435 IKEQAVKID 461
++ + K +
Sbjct: 144 LEHISHKFE 152
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +1
Query: 46 ILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATI 225
IL +E + +G +NI A + V +RT+LGP+GMDK++ +G I+NDGATI
Sbjct: 14 ILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATI 73
Query: 226 MKLLDIIHPALKLL 267
++ +D+ + KL+
Sbjct: 74 LEQMDVDNQIAKLM 87
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Frame = +2
Query: 494 IEVCITAMSSKLIHQQKDHFSKIVVDAVLS---LDTPLLPLDMIGIKKVPGGALEDS 655
++ C+T +SSK++++ K ++I V AVL+ L+ + LD+I ++ GG LED+
Sbjct: 162 VQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDT 218
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3
Query: 249 PCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVR 407
P AK LV++A+ QD EVGDGTTSVVI+A E+LKR V +HP +I R
Sbjct: 27 PAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVRNKIHPTSIISGYR 79
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +1
Query: 172 LIVDHNGKAVISNDGATIMKLLDIIHPALKLLWILQSLK 288
++VD G I+NDGATI+++L++ HPA K+L L L+
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQ 39
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Frame = +2
Query: 482 KRSPIEVCITAMSSKLIHQQKDHFSKIVVDAVLSLDTP------LLPLDMIGIKKVPGGA 643
K S I T+MSSKLI+ D F+ +VVDAV ++ T P+ I I K G +
Sbjct: 130 KDSLINCAKTSMSSKLINSDSDFFANLVVDAVQAVKTTNAKGEVKYPIKSINILKAHGKS 189
Query: 644 LEDSF 658
+DS+
Sbjct: 190 AKDSY 194
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +3
Query: 246 SPCAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLA 425
+P A + A +QD GDGTTS V+ GE++K+ + ++EG HPR L+ A R
Sbjct: 70 NPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRAT 129
Query: 426 IEKIKE 443
+E +++
Sbjct: 130 LEFLEK 135
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 103 NINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 252
NINA + + D ++T LGP+G K++V G ++ DG T++K + I +P
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNP 71
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +3
Query: 273 IAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAV 452
IA ++ VGDGTT+ +ILA EI+ V G +P L + + A I +K + +
Sbjct: 639 IASKTNSSVGDGTTTAIILAREIINLGLLAVATGANPVALRKGIDKAVHELIGILKTKCI 698
Query: 453 KIDNK 467
+ K
Sbjct: 699 PVSTK 703
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 124 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 252
+ +AV TLGPRG + +++D G + NDG TI + +++ P
Sbjct: 59 LANAVGVTLGPRGRN-VVLDEYGSPKVVNDGVTIARAIELYDP 100
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 255 AKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEK 434
A + ++A + GDGTT+ +LA EI+K V G +P L + + IE+
Sbjct: 106 AALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVHGLIEE 165
Query: 435 IKEQA 449
++++A
Sbjct: 166 LEKKA 170
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 133 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 252
AV TLGPRG + +++D G + NDG TI + +++ P
Sbjct: 67 AVAVTLGPRGRN-VVLDEFGSPKVVNDGVTIARAIELADP 105
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 255 AKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEK 434
A + ++A + GDGTT+ +LA EI+K V G +P + + + +E+
Sbjct: 111 AALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEE 170
Query: 435 IKEQA 449
+++++
Sbjct: 171 LEKKS 175
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +3
Query: 276 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 455
AK+ D GDGTT+ V+LA ++ V G +P + R + ++ +E++K+ + +
Sbjct: 135 AKTNDL-AGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKLSKE 193
Query: 456 IDN 464
+++
Sbjct: 194 VED 196
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 124 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 252
+ D V TLGP+G + ++ G I NDG T+ + +++ P
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP 121
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 35.1 bits (77), Expect = 0.054
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 109 NACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP 252
N + D V TLGP+G + ++ G I NDG T+ K +++ P
Sbjct: 70 NGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDP 117
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = +3
Query: 276 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 455
AK+ D GDGTT+ V+LA ++ V G +P + R + ++ + ++++ + +
Sbjct: 131 AKTNDL-AGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKMSKE 189
Query: 456 IDN 464
+++
Sbjct: 190 VED 192
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 124 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLD 240
+ DAV+ T+GP+G +I G ++ DG T+ K ++
Sbjct: 92 LADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIE 130
>06_03_0769 +
24448483-24448825,24449228-24449305,24450812-24450855,
24451299-24451362,24451543-24451634,24451988-24452234,
24452632-24452775,24452905-24453011,24453096-24453149,
24453221-24453304,24454448-24454611,24455003-24455147
Length = 521
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +2
Query: 485 RSPIEVCITAMSSKLIHQQKDHFSKIVVDAVLSLDTP 595
R P+++C++ SS L++++ DH + V+ L ++ P
Sbjct: 158 RVPLQICVSQKSSNLLNEEADHVVPVPVNFPLPIEQP 194
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 124 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLD 240
+ DAV+ T+GP+G + +I + ++ DG T+ K ++
Sbjct: 139 LADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIE 177
>04_04_0185 - 23403479-23403868,23404018-23404023
Length = 131
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +3
Query: 291 AEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLI----RAVRTASRLAIEKIKEQAVKI 458
A DG S+ I G+ RL+ V +GV L+ + VR A L +E++K++ +
Sbjct: 24 AAKADGVISMAI-TGDDRDRLE-VVGDGVDVTCLVTCLRKKVRFADVLQVEEVKDKKPEE 81
Query: 459 DNKSPEEQR 485
+ K PEE++
Sbjct: 82 EKKKPEEEK 90
>02_05_1217 + 34999631-34999945,35000670-35000835,35001908-35002005,
35002245-35002319,35002413-35002481,35002552-35002637,
35002710-35002827,35003575-35003902,35003995-35005682,
35005822-35005881,35005953-35006027,35006105-35006197,
35006298-35006372,35006464-35006532,35006614-35006682,
35006994-35007113
Length = 1167
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 482 KRSPIEVCITAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLD 610
+R +E CI + KL+H KD K+V A + L T + D
Sbjct: 1057 QRKAMENCIDTLIVKLLHATKDAALKVVNQAHICLTTVVTQFD 1099
>02_04_0554 -
23831212-23832163,23833173-23833438,23833694-23833748,
23834384-23834436,23834512-23834588,23834730-23834862,
23834958-23835098,23835840-23835960,23836137-23836242,
23836523-23836592,23836716-23836885,23837253-23837277,
23837662-23837777,23838926-23839217
Length = 858
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 94 LVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAV 201
L AC +++ + T+G G + +V HNG+A+
Sbjct: 314 LYEGSTACVVIIRGNQITVGNVGDSRCVVSHNGQAI 349
>10_08_1046 + 22542074-22544749,22544837-22545544
Length = 1127
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 494 IEVCITAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFPGFPE 673
IE+ T S +L D F+++ SL P L + MI + + G + P+
Sbjct: 996 IEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQ 1055
Query: 674 WA 679
W+
Sbjct: 1056 WS 1057
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 153 SPWYGQADCRSQWKGGYIKRWCNDHEATGYHSP 251
S W A C SQ G + W N +E TG H P
Sbjct: 480 SAWPTDAGCTSQ-AGSVNESWDNANEGTGSHVP 511
>08_02_1449 - 27174451-27178005
Length = 1184
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 204 IKRWCNDHEATGYHSPCAKTLVDI---AKSQDAEVGDGTTSVVI 326
+KRW D +A Y + L D A +DA++GD TT V+
Sbjct: 62 VKRWMKDLKAVAYEAD--DVLDDFHYEALRRDAQIGDSTTDKVL 103
>04_03_0984 - 21432119-21432157,21432722-21434068
Length = 461
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 503 CITAMSSKLIHQQKDHFSKIVVDAVLSLD 589
C+ A S++ + ++DH + + DAV SLD
Sbjct: 380 CLPADSAERLAIERDHLGREIADAVASLD 408
>02_04_0488 +
23397480-23397687,23397777-23397805,23398462-23398564,
23398811-23398982,23399380-23399440,23399757-23399889,
23400438-23400709,23400776-23400843,23401096-23401235,
23401413-23401499,23401580-23402088,23402173-23402990,
23403024-23403222,23403662-23403817
Length = 984
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 267 VDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIE 431
+++A +DA D + SV + GE++ R+ G+ LI +R+ + +E
Sbjct: 201 MELAAGEDANGLDASNSVFLFVGEVISRVSRRGSTGILVAELIPRIRSHLKRCME 255
>02_04_0485 +
23338980-23339187,23339277-23339305,23339962-23340064,
23340311-23340482,23340880-23340940,23341257-23341389,
23341938-23342208,23342595-23342734,23342912-23342998,
23343078-23343586,23343671-23344488,23344522-23344720,
23345552-23345696,23345728-23345782,23347652-23347778,
23347867-23347936,23348448-23348553,23348636-23348747,
23349243-23349365,23349468-23349627,23349751-23349827,
23349925-23349977,23350151-23350205,23350500-23351174
Length = 1495
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 267 VDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIE 431
+++A +DA D + SV + GE++ R+ G+ LI +R+ + +E
Sbjct: 201 MELAAGEDANGLDASNSVFLFVGEVISRVSRRGSTGILVAELIPRIRSHLKRCME 255
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,579,630
Number of Sequences: 37544
Number of extensions: 417910
Number of successful extensions: 1413
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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