Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0041
(692 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36720.1 68417.m05210 abscisic acid-responsive HVA22 family p... 87 8e-18
At4g24960.1 68417.m03576 ABA-responsive protein (HVA22d) identic... 83 2e-16
At5g50720.1 68418.m06285 ABA-responsive protein (HVA22e) identic... 78 5e-15
At1g69700.1 68414.m08021 ABA-responsive protein (HVA22c) identic... 77 1e-14
At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family p... 73 2e-13
At1g74520.1 68414.m08633 ABA-responsive protein (HVA22a) identic... 68 7e-12
At5g62490.1 68418.m07843 ABA-responsive protein (HVA22b) identic... 64 6e-11
At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family p... 60 2e-09
At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family p... 58 4e-09
At2g36020.1 68415.m04423 abscisic acid-responsive HVA22 family p... 58 7e-09
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 57 1e-08
At5g47430.1 68418.m05844 expressed protein 31 0.96
At5g38150.1 68418.m04598 expressed protein 30 1.3
At2g18950.1 68415.m02212 homogentisate phytylprenyltransferase f... 30 1.3
At4g15060.1 68417.m02314 F-box protein-related contains weak sim... 29 2.2
At2g28800.2 68415.m03502 chloroplast membrane protein (ALBINO3) ... 29 2.2
At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3) ... 29 2.9
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 28 5.1
At4g25290.1 68417.m03637 deoxyribodipyrimidine photolyase family... 28 6.8
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 28 6.8
At3g19720.2 68416.m02498 dynamin family protein identical to cDN... 27 8.9
At3g19720.1 68416.m02497 dynamin family protein identical to cDN... 27 8.9
>At4g36720.1 68417.m05210 abscisic acid-responsive HVA22 family
protein low similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 227
Score = 87.4 bits (207), Expect = 8e-18
Identities = 38/86 (44%), Positives = 53/86 (61%)
Frame = +1
Query: 250 VPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCY 429
+P Y + KA+ES +++ K L YW Y FS+VE F+D I+ WFPLY+ +K F++W
Sbjct: 48 LPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFAFLVWLQ 107
Query: 430 LPTEYNGSLVIYYRIIRPYYQKHHGR 507
LPT GS IY IRP+ +H R
Sbjct: 108 LPT-VEGSKQIYNNQIRPFLLRHQAR 132
>At4g24960.1 68417.m03576 ABA-responsive protein (HVA22d) identical
to AtHVA22d [Arabidopsis thaliana] GI:4884938
Length = 135
Score = 82.6 bits (195), Expect = 2e-16
Identities = 32/85 (37%), Positives = 53/85 (62%)
Frame = +1
Query: 244 LRVPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIW 423
L P Y S+ A+ES K DD +WL YW++Y+ S+ E ++ W P+++ +K +FV W
Sbjct: 21 LLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVKLVFVAW 80
Query: 424 CYLPTEYNGSLVIYYRIIRPYYQKH 498
LP ++ G+ IY R++R ++KH
Sbjct: 81 LVLP-QFQGAAFIYNRVVREQFKKH 104
>At5g50720.1 68418.m06285 ABA-responsive protein (HVA22e) identical
to AtHVA22e [Arabidopsis thaliana] GI:11225589
Length = 116
Score = 78.2 bits (184), Expect = 5e-15
Identities = 30/85 (35%), Positives = 53/85 (62%)
Frame = +1
Query: 244 LRVPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIW 423
L P Y S+ A+ESP K DD +WL YW++Y+ ++ E ++ W P+++ K +FV W
Sbjct: 21 LLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTAKLVFVAW 80
Query: 424 CYLPTEYNGSLVIYYRIIRPYYQKH 498
LP ++ G+ IY +++R ++K+
Sbjct: 81 LVLP-QFRGAAFIYNKVVREQFKKY 104
>At1g69700.1 68414.m08021 ABA-responsive protein (HVA22c) identical
to AtHVA22c [Arabidopsis thaliana] GI:4884936
Length = 184
Score = 76.6 bits (180), Expect = 1e-14
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 229 MQLDRLRVPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKC 408
+ L L P Y S+KA+E+ +D +WLTYWV+YA S+ E + WFP++ +K
Sbjct: 23 LPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISLFELTFSKPLEWFPIWPYMKL 82
Query: 409 IFVIWCYLPTEYNGSLVIYYRIIRPYYQ-KHHGRTMIW 519
+ W LP ++NG+ IY IRP+Y+ T IW
Sbjct: 83 FGICWLVLP-QFNGAEHIYKHFIRPFYRDPQRATTKIW 119
>At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family
protein contains Pfam profile PF03134: TB2/DP1, HVA22
family
Length = 158
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +1
Query: 244 LRVPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIW 423
L P Y S +A+ESP DD +WLTYW++Y+ +I E ++ W P + LK +F +W
Sbjct: 21 LLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAWLPFWPYLKLLFCMW 80
Query: 424 CYLPTEYNGSLVIYYRIIRPY 486
LP ++G+ IY +R Y
Sbjct: 81 LVLPM-FSGAAYIYSNFVRQY 100
>At1g74520.1 68414.m08633 ABA-responsive protein (HVA22a) identical
to AtHVA22a [Arabidopsis thaliana] GI:4884932
Length = 177
Score = 67.7 bits (158), Expect = 7e-12
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +1
Query: 253 PAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYL 432
P Y S++A+E+ DD +WLTYWV+Y+ +++E ++ W P++ +K I W +
Sbjct: 29 PLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEWLPIWSYMKLILTCWLVI 88
Query: 433 PTEYNGSLVIYYRIIRPYY 489
P ++G+ +Y +RP +
Sbjct: 89 P-YFSGAAYVYEHFVRPVF 106
>At5g62490.1 68418.m07843 ABA-responsive protein (HVA22b) identical
to AtHVA22b [Arabidopsis thaliana] GI:4884934
Length = 167
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/96 (32%), Positives = 46/96 (47%)
Frame = +1
Query: 253 PAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYL 432
P Y S++A+ES DD +WLTYW +Y+ + E ++ W PLY K W L
Sbjct: 29 PLYASVRAIESRSHGDDKQWLTYWALYSLIKLFELTFFRLLEWIPLYPYAKLALTSWLVL 88
Query: 433 PTEYNGSLVIYYRIIRPYYQKHHGRTMIWANTGKQD 540
P NG+ +Y +R + H +W K+D
Sbjct: 89 P-GMNGAAYLYEHYVRSFLLSPH-TVNVWYVPAKKD 122
>At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 166
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +1
Query: 253 PAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 426
PAY K +E P+ W YW++ A +I E D +V W P+Y K F I+
Sbjct: 8 PAYECFKTVELNKPEIQQLQFWCQYWIIVAALTIFERIGDALVSWLPMYSEAKLAFFIYL 67
Query: 427 YLPTEYNGSLVIYYRIIRPYYQKHHG---RTMIWANTGKQD*NAVLMQ 561
+ P + G+ +Y RPY KH R ++ T +D + +Q
Sbjct: 68 WFP-KTKGTTYVYDSFFRPYIAKHENEIDRNLVKVKTRAKDMAMIYLQ 114
>At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 296
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 253 PAYMSMKALES--PQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 426
PAY K +E P+ + W YW++ AC ++ E D V W P+Y K F I+
Sbjct: 19 PAYECYKTVEKNRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYSEAKLAFFIYL 78
Query: 427 YLPTEYNGSLVIYYRIIRPYYQKH 498
+ P + G+ +Y RPY +H
Sbjct: 79 WYP-KTRGTTYVYESFFRPYLSQH 101
>At2g36020.1 68415.m04423 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 258
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +1
Query: 253 PAYMSMKALESPQKDDDTK--WLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 426
PA+ K +E + D + W YW++ A S E DF + W PLY +K +F ++
Sbjct: 19 PAFECFKTVEKNKVDIEELRFWCQYWILLALISSFERVGDFFISWLPLYGEMKVVFFVYL 78
Query: 427 YLPTEYNGSLVIYYRIIRPYYQKH 498
+ P + G+ +Y +++PY +H
Sbjct: 79 WYP-KTKGTRHVYETLLKPYMAQH 101
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 253 PAYMSMKALES--PQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 426
PAY KA+E P+ W YW++ A +I E D + W PLY K F I+
Sbjct: 19 PAYECYKAVEKNKPEMQQLRFWCQYWILVAALTIFERVGDALASWVPLYCEAKLAFFIYL 78
Query: 427 YLPTEYNGSLVIYYRIIRPYYQKH 498
+ P + G+ +Y +PY KH
Sbjct: 79 WFP-KTRGTTYVYDSFFQPYVAKH 101
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 270 HRHVRGYTKPIELHINSAPKPNTKYKPVNATKPKKMYNLFTPTFCSAS 127
HRH RG T+ + H +P + PV ATK + NL + F S
Sbjct: 734 HRHHRGETERSQHHHRKRSEPPSSEPPVPATKAEIENNLKSSVFARIS 781
>At5g38150.1 68418.m04598 expressed protein
Length = 574
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 219 APKPNTKYKPVNATKPKKMYNLFTPTF 139
+PKP K+ PV KP++ ++ TPTF
Sbjct: 528 SPKPVGKFTPVQRGKPRRYSSVGTPTF 554
>At2g18950.1 68415.m02212 homogentisate phytylprenyltransferase
family protein (HPT1) / tocopherol phytyltransferase
family protein (TPT1) identical to gi:17104828; contains
Pfam profile PF01040: UbiA prenyltransferase family;
identical to cDNA tocopherol polyprenyltransferase
(TPT1) GI:17104827
Length = 393
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 328 VYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 420
+ A FSI+ ++ +IVG +PL+W L F++
Sbjct: 186 IVASFSIMSFWLGWIVGSWPLFWALFVSFML 216
>At4g15060.1 68417.m02314 F-box protein-related contains weak
similarity to F-box domain Pfam:PF00646
Length = 572
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 208 RFRS*INMQLDRLRVPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFP 387
R RS IN+ L R P S++ S + + + W++ A F V S + FP
Sbjct: 228 RLRSFINLNLQLHRAPIIESLRLKFSLGRSIKPQNIKQWIIIAVFRCVRELS---INLFP 284
Query: 388 LY 393
LY
Sbjct: 285 LY 286
>At2g28800.2 68415.m03502 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 348
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 259 YMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLL 402
Y+SM+ ++ PQ DD + T V ++ YF+ + +YWL+
Sbjct: 293 YVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLV 340
>At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 462
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 259 YMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWL 399
Y+SM+ ++ PQ DD + T V ++ YF+ + +YWL
Sbjct: 293 YVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWL 339
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -2
Query: 463 RSRGTRCIQSAGSTRSRRCTLTASTMETSRR*NRKSTPR*KNRRTPPNM*AILYRHPSAV 284
+SR R S RSRR + S+ E+S RKS+ + KNR P RH S+
Sbjct: 802 KSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPG--KSRRRHVSSR 859
Query: 283 TP 278
+P
Sbjct: 860 SP 861
>At4g25290.1 68417.m03637 deoxyribodipyrimidine photolyase family
protein / DNA photolyase family protein contains Pfam
domain, PF00875: deoxyribodipyrimidine photolyase
Length = 581
Score = 27.9 bits (59), Expect = 6.8
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 56 LQEYKDNIEQSLNDKSKPWT 115
L+ Y+DN++ +N K++ WT
Sbjct: 356 LEHYRDNVDNIVNSKNRVWT 375
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -2
Query: 463 RSRGTRCIQSAGSTRSRRCTLTASTMETSRR*NRKSTPR*KNRRTPP 323
+SR R S RSRR + S+ E+S RKS+ + KNR P
Sbjct: 832 KSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSP 878
>At3g19720.2 68416.m02498 dynamin family protein identical to cDNA
dynamin-like protein (ARC5) GI: 30349145; contains Pfam
profile PF00350: Dynamin family
Length = 741
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -1
Query: 425 HQITKMHFNSQYNGN-QPTMKSEKYSTIEKQAYTTQYVSHFVSSSFCGDSRAFIDMYAGT 249
H++ S +N + T KS + +E A TT+YV+ + + R F+D + GT
Sbjct: 536 HEVFLKRVASAFNSFVESTEKSCRDKCMEDLASTTRYVTWSLHNKNRAGLRQFLDSFGGT 595
Query: 248 RSRSS 234
++
Sbjct: 596 EHNTT 600
>At3g19720.1 68416.m02497 dynamin family protein identical to cDNA
dynamin-like protein (ARC5) GI: 30349145; contains Pfam
profile PF00350: Dynamin family
Length = 777
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -1
Query: 425 HQITKMHFNSQYNGN-QPTMKSEKYSTIEKQAYTTQYVSHFVSSSFCGDSRAFIDMYAGT 249
H++ S +N + T KS + +E A TT+YV+ + + R F+D + GT
Sbjct: 536 HEVFLKRVASAFNSFVESTEKSCRDKCMEDLASTTRYVTWSLHNKNRAGLRQFLDSFGGT 595
Query: 248 RSRSS 234
++
Sbjct: 596 EHNTT 600
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,832,272
Number of Sequences: 28952
Number of extensions: 358616
Number of successful extensions: 863
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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