Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0039
(691 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.44
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.44
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.44
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.44
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.44
AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine 3-mon... 25 0.58
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 25 0.58
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 25 0.58
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 7.2
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 21 7.2
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 21 7.2
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 21 9.5
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.44
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 544 LMFNIARSCFIIVLILNYH 600
+MF +A S + V++LNYH
Sbjct: 281 IMFMVASSVVLTVVVLNYH 299
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.44
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 544 LMFNIARSCFIIVLILNYH 600
+MF +A S + V++LNYH
Sbjct: 281 IMFMVASSVVLTVVVLNYH 299
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.44
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 544 LMFNIARSCFIIVLILNYH 600
+MF +A S + V++LNYH
Sbjct: 281 IMFMVASSVVLTVVVLNYH 299
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.44
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 544 LMFNIARSCFIIVLILNYH 600
+MF +A S + V++LNYH
Sbjct: 281 IMFMVASSVVLTVVVLNYH 299
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.44
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 544 LMFNIARSCFIIVLILNYH 600
+MF +A S + V++LNYH
Sbjct: 281 IMFMVASSVVLTVVVLNYH 299
>AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 212
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 296 LCNSLKSSEIRYDRCVHRRIRFQVXLYRSFIY 201
LCNS+ S Y +CV R ++Q + + F++
Sbjct: 163 LCNSVTFSNFGYKQCVENR-KWQNKVIQKFLW 193
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 296 LCNSLKSSEIRYDRCVHRRIRFQVXLYRSFIY 201
LCNS+ S Y +CV R ++Q + + F++
Sbjct: 396 LCNSVTFSNFGYKQCVENR-KWQNKVIQKFLW 426
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 296 LCNSLKSSEIRYDRCVHRRIRFQVXLYRSFIY 201
LCNS+ S Y +CV R ++Q + + F++
Sbjct: 396 LCNSVTFSNFGYKQCVENR-KWQNKVIQKFLW 426
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -3
Query: 296 LCNSLKSSEIRYDRCVHRRIRFQ 228
LCN K + +HR + FQ
Sbjct: 304 LCNGSKGISPEQEELIHRLVYFQ 326
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 361 TSHSAYHVARVQHIHTLRLCNVCE 432
TS S YH+ + IH LC +
Sbjct: 199 TSLSVYHLVEISEIH-FDLCQAAD 221
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 361 TSHSAYHVARVQHIHTLRLCNVCE 432
TS S YH+ + IH LC +
Sbjct: 195 TSLSVYHLVEISEIH-FDLCQAAD 217
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = +1
Query: 325 PNHEIP*RKKPNTSHSAYHVARVQHIH 405
P+HEI + + + + ++QH+H
Sbjct: 105 PHHEIKLQHLHQSKFNPHEEVKLQHLH 131
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,120
Number of Sequences: 336
Number of extensions: 2659
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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