Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0039
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053905-1|AAH53905.1|  328|Homo sapiens CXXC6 protein protein.        31   5.1  
AL713888-4|CAI15118.1| 2136|Homo sapiens leukemia-associated pro...    31   5.1  
AL513534-3|CAH70220.1| 2136|Homo sapiens leukemia-associated pro...    31   5.1  
AF430147-1|AAM88301.1| 2136|Homo sapiens leukemia-associated pro...    31   5.1  
AB051463-1|BAB21767.1|  735|Homo sapiens KIAA1676 protein protein.     31   5.1  

>BC053905-1|AAH53905.1|  328|Homo sapiens CXXC6 protein protein.
          Length = 328

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -1

Query: 526 LSPSHSKLDRARERWTDFSRCACSVTSRHALIHKHYTSATCECVERELH 380
           LSP+  KL    E W+D              I   + S   EC  RELH
Sbjct: 172 LSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELH 220


>AL713888-4|CAI15118.1| 2136|Homo sapiens leukemia-associated protein
            with a CXXC domain protein.
          Length = 2136

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -1

Query: 526  LSPSHSKLDRARERWTDFSRCACSVTSRHALIHKHYTSATCECVERELH 380
            LSP+  KL    E W+D              I   + S   EC  RELH
Sbjct: 1980 LSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELH 2028


>AL513534-3|CAH70220.1| 2136|Homo sapiens leukemia-associated protein
            with a CXXC domain protein.
          Length = 2136

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -1

Query: 526  LSPSHSKLDRARERWTDFSRCACSVTSRHALIHKHYTSATCECVERELH 380
            LSP+  KL    E W+D              I   + S   EC  RELH
Sbjct: 1980 LSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELH 2028


>AF430147-1|AAM88301.1| 2136|Homo sapiens leukemia-associated protein
            with a CXXC domain protein.
          Length = 2136

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -1

Query: 526  LSPSHSKLDRARERWTDFSRCACSVTSRHALIHKHYTSATCECVERELH 380
            LSP+  KL    E W+D              I   + S   EC  RELH
Sbjct: 1980 LSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELH 2028


>AB051463-1|BAB21767.1|  735|Homo sapiens KIAA1676 protein protein.
          Length = 735

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -1

Query: 526 LSPSHSKLDRARERWTDFSRCACSVTSRHALIHKHYTSATCECVERELH 380
           LSP+  KL    E W+D              I   + S   EC  RELH
Sbjct: 579 LSPAEEKLPHIDEYWSDSEHIFLDANIGGVAIAPAHGSVLIECARRELH 627


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,972,140
Number of Sequences: 237096
Number of extensions: 1418708
Number of successful extensions: 2032
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)