Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0038
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.78 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.0  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   1.8  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    22   4.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   7.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 67  MSC*LFFKLQEWINIFLTFI 8
           ++C LFF +  WI+ FL F+
Sbjct: 134 ITCELFFVILLWISFFLNFM 153


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 692 FMKTYET*TY*ITRVSINWLSVANTCILLYCIIILRFRHSSQRLLLFI 549
           F+   E  T   + V I WL V N C + Y  + L    S +RL LF+
Sbjct: 532 FLLKRENYTLPASAVGIAWLYVDNDCCIRY-DVSLSGLGSDRRLELFL 578


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +1

Query: 160 ALSTCIRLCELGVDPEVLAHVIKEIRKMGENVKKHLIY 273
           A ++   +C LGV PE+   V +E+R + ++  + + +
Sbjct: 2   AAASSFFICILGVYPEIQEKVYQELRDIFQDSDRPITF 39


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 334 TRMIFKSILDLSYFNAPN 387
           T M+   I+ +S+FN PN
Sbjct: 48  TIMLIYKIIQVSFFNIPN 65


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +1

Query: 193 GVDPEVLAHVIKEIRKMGENV 255
           G+D   + H+++EI ++G ++
Sbjct: 520 GLDKADMVHLVEEIERLGSDL 540


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 158 KHCQLASDYASWA*TLKFWLTLSRKSEKWEKMS 256
           + C+LA+       T+K W    R  +K ++M+
Sbjct: 100 RRCELAAQLNLPESTIKVWFQNRRMKDKRQRMA 132


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 221 LSRKSEKWEKMSKSI*FTNIDKANYQKF 304
           + +K E WE++ K      I K  YQ +
Sbjct: 89  VKQKPEWWEQLQKKFDPQGIYKKRYQNY 116


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 121 QISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEI 234
           ++   +  G D  ++S C  L  L    EV   ++KE+
Sbjct: 291 EVDTFMFEGHDTTSVSICYTLMLLANHREVQEEILKEM 328


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 121 QISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEI 234
           ++   +  G D  ++S C  L  L    EV   ++KE+
Sbjct: 291 EVDTFMFEGHDTTSVSICYTLMLLANHREVQEEILKEM 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,948
Number of Sequences: 336
Number of extensions: 3114
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)