Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0038
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125183-1|AAI25184.1|   82|Homo sapiens similar to RIKEN cDNA 2...    73   1e-12
AL356754-1|CAH70226.1|   82|Homo sapiens protein ( Human DNA seq...    73   1e-12
AL138695-3|CAH72711.1|   82|Homo sapiens protein ( Human DNA seq...    73   1e-12
AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c...    30   9.1  

>BC125183-1|AAI25184.1|   82|Homo sapiens similar to RIKEN cDNA
           2410129H14 protein.
          Length = 82

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 32/60 (53%), Positives = 45/60 (75%)
 Frame = +1

Query: 79  AQVGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVK 258
           A +   RET  ++ +IS++LNTGLD+E LS C+RLCE G++PE L+ VIKE+RK  E +K
Sbjct: 16  ANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK 75


>AL356754-1|CAH70226.1|   82|Homo sapiens protein ( Human DNA
           sequence from clone RP11-11C5 on chromosome 13 Contains
           a 60S ribosomal protein L21 (RPL21) pseudogene and the
           3' end of a  ).
          Length = 82

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 32/60 (53%), Positives = 45/60 (75%)
 Frame = +1

Query: 79  AQVGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVK 258
           A +   RET  ++ +IS++LNTGLD+E LS C+RLCE G++PE L+ VIKE+RK  E +K
Sbjct: 16  ANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK 75


>AL138695-3|CAH72711.1|   82|Homo sapiens protein ( Human DNA
           sequence from clone RP11-342J4 on chromosome 13. ).
          Length = 82

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 32/60 (53%), Positives = 45/60 (75%)
 Frame = +1

Query: 79  AQVGQARETFQLIHQISQLLNTGLDVEALSTCIRLCELGVDPEVLAHVIKEIRKMGENVK 258
           A +   RET  ++ +IS++LNTGLD+E LS C+RLCE G++PE L+ VIKE+RK  E +K
Sbjct: 16  ANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEALSSVIKELRKATEALK 75


>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
            DNAH5 protein.
          Length = 4624

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = +1

Query: 232  IRKMGENVKKHLIYKHR*SQLSEIYNHEFPNKQMTRMIFKSILDLSYFNA---PNISRYE 402
            I + G+ V   ++   +  + +  YN E P +      F SI+D+ +  A   P   R +
Sbjct: 2664 INEWGDQVTNEIV--RQLMEQNGFYNLEKPGE------FTSIVDIQFLAAMIHPGGGRND 2715

Query: 403  IPQYLNKNKCLFSCTL 450
            IPQ L +   +F+CTL
Sbjct: 2716 IPQRLKRQFSIFNCTL 2731


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,580,077
Number of Sequences: 237096
Number of extensions: 1661776
Number of successful extensions: 6587
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6587
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)