Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0038
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   0.52 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.4  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.5  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   8.5  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 355 ILDLSYFNAPNISRYEIPQYLNKNKCLFSCTL*CI*RLTY 474
           ++ L Y+   N S Y+I Q + K   LF+CT  C+  + Y
Sbjct: 278 VMSLWYWIDRN-SAYKIDQRIQKGLFLFACTNSCMNPIVY 316


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 72  EERSSRPSAGNLSINPPDITTP 137
           EE S+RPS       P + TTP
Sbjct: 46  EELSARPSFKTFDKGPKNYTTP 67


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
 Frame = +1

Query: 184 CELGVDPEVLAHVIKEIRKMGENV-------KKHLIYKHR*SQLSEIYNHEFPNKQMTRM 342
           C  G+D   + +   E R+MG  V          +  K    +L ++  +  P++     
Sbjct: 189 CAFGIDMSSMTNENSEFRRMGREVFAVNFMNVMRMKLKQFMPRLYDLLGYVMPDRTFAPF 248

Query: 343 IFKSILD-LSYFNAPNISRYEIPQYLN 420
             + + D + Y N  NI R   P ++N
Sbjct: 249 FTRVVTDTIKYRNDNNIVR---PDFIN 272


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 319 PNKQMTRMIFKSILDLSYFNAPNISRYEIPQY 414
           P  +   M +K    LS  +  N   YEIP Y
Sbjct: 609 PRGKPEGMRYKMFFFLSSMDESNTKSYEIPLY 640


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 319 PNKQMTRMIFKSILDLSYFNAPNISRYEIPQY 414
           P  +   M +K    LS  +  N   YEIP Y
Sbjct: 609 PRGKPEGMRYKMFFFLSSMDESNTKSYEIPLY 640


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 424 FYLNIGVFHTYLYLGH*SMIN 362
           F+L I VF+ + YL     IN
Sbjct: 434 FFLAINVFYWFAYLSRSERIN 454


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +1

Query: 340 MIFKSILDLS-YFNAPNISRYEIPQYLNKNKCLFSCTL 450
           + FK  + +       +IS   I +YL    C  +C L
Sbjct: 46  LTFKDFIKMQELLQEEDISEGNIKKYLTNYSCFITCAL 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,781
Number of Sequences: 438
Number of extensions: 3649
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)