Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0035
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   6.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.9  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   8.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.9  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative
          tachykinin receptor protein.
          Length = 450

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -2

Query: 78 AVTSRTC-ATESAEGSGREPAWS 13
          A TS  C A     GSG EP WS
Sbjct: 19 AGTSSCCPAGTGLNGSGTEPGWS 41


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/27 (33%), Positives = 10/27 (37%)
 Frame = -2

Query: 252  WSLXTAGRWPWKSESAKECATTHHPKQ 172
            W +     WP   ES   C T    KQ
Sbjct: 1193 WLVKDPKHWPKNIESGNTCETAKEEKQ 1219


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 573 PVSDDRFGTLESLTVLHQGFPLNFEPD-QA*FHHL 674
           P+S  +  T+ S   L+ GFP    P+ ++ F HL
Sbjct: 95  PLSSRKSPTVSSAAALNSGFPSIANPNPRSPFRHL 129


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 573 PVSDDRFGTLESLTVLHQGFPLNFEPD-QA*FHHL 674
           P+S  +  T+ S   L+ GFP    P+ ++ F HL
Sbjct: 95  PLSSRKSPTVSSAAALNSGFPSIANPNPRSPFRHL 129


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 559  RTNRTHLVAGSVRSFPQIAXVDINFKTV 476
            R+NR  + + +V++F  +   D+N K +
Sbjct: 1628 RSNRYEIRSNNVQTFDAMLLYDVNMKVI 1655


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 559  RTNRTHLVAGSVRSFPQIAXVDINFKTV 476
            R+NR  + + +V++F  +   D+N K +
Sbjct: 1629 RSNRYEIRSNNVQTFDAMLLYDVNMKVI 1656


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,625
Number of Sequences: 2352
Number of extensions: 15562
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)