Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0034
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK124784-1|BAC85948.1| 218|Homo sapiens protein ( Homo sapiens ... 31 4.0
Z21507-1|CAA79716.1| 281|Homo sapiens human elongation factor-1... 31 5.2
BT007242-1|AAP35906.1| 647|Homo sapiens eukaryotic translation ... 31 5.2
BC094806-1|AAH94806.1| 257|Homo sapiens EEF1D protein protein. 31 5.2
BC062535-1|AAH62535.1| 281|Homo sapiens eukaryotic translation ... 31 5.2
BC012819-1|AAH12819.1| 281|Homo sapiens eukaryotic translation ... 31 5.2
BC009907-1|AAH09907.1| 281|Homo sapiens eukaryotic translation ... 31 5.2
BC007847-1|AAH07847.1| 647|Homo sapiens EEF1D protein protein. 31 5.2
BC000678-1|AAH00678.2| 550|Homo sapiens EEF1D protein protein. 31 5.2
AK024550-1|BAB14925.1| 647|Homo sapiens protein ( Homo sapiens ... 31 5.2
AJ415054-1|CAC94212.1| 86|Homo sapiens immunoglobulin heavy ch... 30 9.1
>AK124784-1|BAC85948.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ42794 fis, clone BRAWH3007783. ).
Length = 218
Score = 31.1 bits (67), Expect = 4.0
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 485 QTQLHLT*SHTPTYGSSHGYNNYGSHATYIPHRSYYTSPQY 607
QTQLH T SHT T+G ++ Y + +HA H S T+ QY
Sbjct: 160 QTQLH-TRSHTDTHGHTYMYLHIYTHAH--KHHSTCTNMQY 197
>Z21507-1|CAA79716.1| 281|Homo sapiens human elongation
factor-1-delta protein.
Length = 281
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 77 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 134
Query: 514 YSNV 525
V
Sbjct: 135 MRQV 138
>BT007242-1|AAP35906.1| 647|Homo sapiens eukaryotic translation
elongation factor 1 delta (guanine nucleotide exchange p
protein.
Length = 647
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 443 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 500
Query: 514 YSNV 525
V
Sbjct: 501 MRQV 504
>BC094806-1|AAH94806.1| 257|Homo sapiens EEF1D protein protein.
Length = 257
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 53 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 110
Query: 514 YSNV 525
V
Sbjct: 111 MRQV 114
>BC062535-1|AAH62535.1| 281|Homo sapiens eukaryotic translation
elongation factor 1 delta (guanine nucleotide exchange p
protein.
Length = 281
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 77 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 134
Query: 514 YSNV 525
V
Sbjct: 135 MRQV 138
>BC012819-1|AAH12819.1| 281|Homo sapiens eukaryotic translation
elongation factor 1 delta (guanine nucleotide exchange p
protein.
Length = 281
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 77 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 134
Query: 514 YSNV 525
V
Sbjct: 135 MRQV 138
>BC009907-1|AAH09907.1| 281|Homo sapiens eukaryotic translation
elongation factor 1 delta (guanine nucleotide exchange p
protein.
Length = 281
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 77 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 134
Query: 514 YSNV 525
V
Sbjct: 135 MRQV 138
>BC007847-1|AAH07847.1| 647|Homo sapiens EEF1D protein protein.
Length = 647
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 443 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 500
Query: 514 YSNV 525
V
Sbjct: 501 MRQV 504
>BC000678-1|AAH00678.2| 550|Homo sapiens EEF1D protein protein.
Length = 550
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 346 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 403
Query: 514 YSNV 525
V
Sbjct: 404 MRQV 407
>AK024550-1|BAB14925.1| 647|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20897 fis, clone ADKA03573. ).
Length = 647
Score = 30.7 bits (66), Expect = 5.2
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +1
Query: 334 HGSGLQARVVNLVILHQDLGCTDQEANQATLHQYLDCQDLEVSQVIPHRATNPATSHIVP 513
HG L R+ +L + +Q L QE QA LE S HRAT P T H+ P
Sbjct: 443 HGE-LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP-GHRATAPQTQHVSP 500
Query: 514 YSNV 525
V
Sbjct: 501 MRQV 504
>AJ415054-1|CAC94212.1| 86|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 86
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 372 N*VYYPSLKTRTMMT--NSLAYFQILTILIQTKDSSAYFQIRQSR 244
N VY PSLK+R M+ S + F + + D++ YF +R R
Sbjct: 27 NTVYNPSLKSRVAMSIDTSQSQFSLKLTSVTAADTAVYFCVRDRR 71
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,649,023
Number of Sequences: 237096
Number of extensions: 1570450
Number of successful extensions: 3179
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3179
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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