Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0034
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 6.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 8.5
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 8.5
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 8.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 8.5
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 515 TPTYGSSHGYNNYGSHATYIPHRSY 589
TP + SH + H+T + H SY
Sbjct: 429 TPHHHHSHAATPHHQHSTPLAHSSY 453
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 542 YNNYGSHATYIPHRSYYTSPQYV 610
YNNY ++ Y ++ Y + Y+
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 542 YNNYGSHATYIPHRSYYTSPQYV 610
YNNY ++ Y ++ Y + Y+
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 542 YNNYGSHATYIPHRSYYTSPQYV 610
YNNY ++ Y ++ Y + Y+
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 542 YNNYGSHATYIPHRSYYTSPQYV 610
YNNY ++ Y ++ Y + Y+
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 542 YNNYGSHATYIPHRSYYTSPQYV 610
YNNY ++ Y ++ Y + Y+
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 542 YNNYGSHATYIPHRSYYTSPQYV 610
YNNY ++ Y ++ Y + Y+
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 542 YNNYGSHATYIPHRSYYTSPQYV 610
YNNY ++ Y ++ Y + Y+
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 542 YNNYGSHATYIPHRSYYTSPQYV 610
YNNY ++ Y ++ Y + Y+
Sbjct: 94 YNNYNNNNNYNNYKKLYYNINYI 116
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 623 LMNIKHTVETYNMSDE 576
L N+K+T+++YN S E
Sbjct: 397 LYNVKNTLDSYNGSME 412
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 379 HQDLGCTDQEANQATLHQYLDCQDL 453
HQ G +D + + YL QDL
Sbjct: 311 HQKDGSSDSVIKRTVVSSYLQLQDL 335
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 379 HQDLGCTDQEANQATLHQYLDCQDL 453
HQ G +D + + YL QDL
Sbjct: 226 HQKDGSSDSVIKRTVVSSYLQLQDL 250
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 379 HQDLGCTDQEANQATLHQYLDCQDL 453
HQ G +D + + YL QDL
Sbjct: 545 HQKDGSSDSVIKRTVVSSYLQLQDL 569
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,070
Number of Sequences: 438
Number of extensions: 3442
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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