Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0033
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   2.4  
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        24   5.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.5  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   9.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.7  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 75  RERLIRPTKPAISIRCKTVGLIRRGKRRIRH*APNAG 185
           R+RL+     A+  R  TV +  RG  R+R  A N G
Sbjct: 572 RQRLLSRNTVALPPRKDTVSIPSRGYARVRFRADNPG 608


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 164 ALSTECRMRREH-RXRSTTALASSISWRVTREVF 262
           ++ T    RR H R +S+    S   W + REVF
Sbjct: 20  SIGTVQPFRRHHLRHQSSFVSRSDFDWNLAREVF 53


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 68  PAFYALLRNTLVLDTL 21
           PAFY  LR+TLV + L
Sbjct: 695 PAFYFALRDTLVAENL 710


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 520 LSCAISALPAPGRARSGHFPGHLPNLCGL 434
           L    + LP P    S   PG++PNL  L
Sbjct: 349 LPVVTAPLPGPSPPSSLGMPGNIPNLSQL 377


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 706 GRNGLPGLAPPRALTACP 653
           G  GLPGLA P  +   P
Sbjct: 728 GDKGLPGLAGPAGIPGAP 745


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,940
Number of Sequences: 2352
Number of extensions: 12521
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)