Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0033
         (728 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g14690.1 68416.m01858 cytochrome P450, putative similar to GB...    30   1.8  
At3g14650.1 68416.m01854 cytochrome P450, putative similar to GB...    30   1.8  
At3g14640.1 68416.m01853 cytochrome P450, putative similar to GB...    28   5.5  

>At3g14690.1 68416.m01858 cytochrome P450, putative similar to
           GB:Q05047 from [Catharanthus roseus]
          Length = 512

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 208 PXTVFTPHPAFGAQCLMRRL 149
           P TV T HP FGAQ +M +L
Sbjct: 493 PYTVITIHPQFGAQLIMHKL 512


>At3g14650.1 68416.m01854 cytochrome P450, putative similar to
           GB:Q05047 from [Catharanthus roseus]
          Length = 512

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 208 PXTVFTPHPAFGAQCLMRRL 149
           P TVFT HP FGA  +M +L
Sbjct: 493 PYTVFTIHPQFGAPLIMHKL 512


>At3g14640.1 68416.m01853 cytochrome P450, putative similar to
           GB:Q05047 from [Catharanthus roseus]
          Length = 514

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 208 PXTVFTPHPAFGAQCLMRRL 149
           P TV T HP FGA  ++R+L
Sbjct: 495 PQTVVTIHPQFGAHLILRKL 514


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,027,633
Number of Sequences: 28952
Number of extensions: 257606
Number of successful extensions: 573
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)