BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0032
(696 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 25 0.59
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 22 4.2
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 22 5.5
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 7.3
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 7.3
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 7.3
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 9.6
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 21 9.6
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 21 9.6
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 21 9.6
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 25.0 bits (52), Expect = 0.59
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 582 ITGSCGSRVKFRRRLRRIYSFTIRKTMQSYF 490
+ G+ G R FR++L I++F T+ YF
Sbjct: 431 LVGNLGMRRNFRKKLDFIFTFITLLTIGLYF 461
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 299 KPEYSDTSILIHYVSYETA 355
KPE SD+ I+ V+Y +A
Sbjct: 171 KPEMSDSEIVAKLVAYTSA 189
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 219 LLTTTVYSIILSYIDFNIILNYT 151
LLTT +ILS ID + +YT
Sbjct: 30 LLTTLTLLVILSSIDRPYLKSYT 52
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 216 LTTTVYSIILSYIDFNIILN 157
+ TTV +++ Y F+I+LN
Sbjct: 96 VVTTVLVVLVGYERFDILLN 115
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 216 LTTTVYSIILSYIDFNIILN 157
+ TTV +++ Y F+I+LN
Sbjct: 96 VVTTVLVVLVGYERFDILLN 115
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 216 LTTTVYSIILSYIDFNIILN 157
+ TTV +++ Y F+I+LN
Sbjct: 96 VVTTVLVVLVGYERFDILLN 115
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.0 bits (42), Expect = 9.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 680 VACYERRKFILIPSKSLFMLSATVISTPLNDGSSPEAAARGLNL 549
V C F ++ S F++S + + NDG S A+ L+L
Sbjct: 32 VPCVYLTSFSVVLSLGSFIVSVYLTTKIDNDGESISLASGWLDL 75
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 48 KRNVVSFCKLPDNLT 92
+ NV+ FC P+N+T
Sbjct: 173 QENVIHFCGDPNNVT 187
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 48 KRNVVSFCKLPDNLT 92
+ NV+ FC P+N+T
Sbjct: 173 QENVIHFCGDPNNVT 187
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 48 KRNVVSFCKLPDNLT 92
+ NV+ FC P+N+T
Sbjct: 172 QENVIHFCGDPNNVT 186
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,466
Number of Sequences: 336
Number of extensions: 2941
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -