Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0028
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ496105-1|ABF47094.1| 223|Homo sapiens progesterone receptor m... 109 1e-23
BC092478-1|AAH92478.1| 223|Homo sapiens progesterone receptor m... 109 1e-23
BC016692-1|AAH16692.1| 223|Homo sapiens progesterone receptor m... 109 1e-23
AJ002030-1|CAA05152.1| 223|Homo sapiens progresterone binding p... 109 1e-23
Y12711-1|CAA73248.1| 195|Homo sapiens putative progesterone bin... 100 5e-21
DQ496104-1|ABF47093.1| 195|Homo sapiens progesterone receptor m... 100 5e-21
CR456993-1|CAG33274.1| 195|Homo sapiens PGRMC1 protein. 100 5e-21
BC034238-1|AAH34238.1| 195|Homo sapiens progesterone receptor m... 100 5e-21
BC008823-1|AAH08823.1| 172|Homo sapiens neuron derived neurotro... 66 8e-11
AY762102-1|AAX07829.1| 172|Homo sapiens cell growth-inhibiting ... 66 8e-11
AF173937-1|AAD51419.1| 172|Homo sapiens secreted protein of unk... 66 8e-11
AB126219-1|BAD72063.1| 172|Homo sapiens neudesin protein protein. 66 8e-11
BC051697-1|AAH51697.1| 264|Homo sapiens cytochrome b5 domain co... 66 1e-10
BC020263-1|AAH20263.1| 264|Homo sapiens cytochrome b5 domain co... 66 1e-10
AK172844-1|BAD18808.1| 264|Homo sapiens protein ( Homo sapiens ... 66 1e-10
AK223135-1|BAD96855.1| 172|Homo sapiens SCIRP10-related protein... 65 2e-10
AJ249131-1|CAB65109.1| 109|Homo sapiens progesterone membrane b... 46 2e-04
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 31 4.9
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 31 4.9
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 31 4.9
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 31 4.9
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 31 4.9
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 31 4.9
AL136082-5|CAI20448.1| 185|Homo sapiens RP1-3J17.2 protein. 31 4.9
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 31 4.9
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 31 4.9
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 31 4.9
AK021777-1|BAB13893.1| 129|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 31 4.9
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 31 4.9
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 31 4.9
>DQ496105-1|ABF47094.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 109 bits (261), Expect = 1e-23
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Frame = +1
Query: 217 VEEIRRNSA*R--KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASE 390
+E++R+ R + LLAVNG +FDVT+G +FYGP GPY FAG+DA+RGLAT +
Sbjct: 105 LEQLRQYDGSRNPRILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164
Query: 391 -NDEYDDVSDLGSDEIASAIEWEEQFRGKYGIVGRLLKLGE 510
DEYDD+SDL + ++ S EWE QF+ KY VGRLLK GE
Sbjct: 165 LRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 205
>BC092478-1|AAH92478.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 109 bits (261), Expect = 1e-23
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Frame = +1
Query: 217 VEEIRRNSA*R--KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASE 390
+E++R+ R + LLAVNG +FDVT+G +FYGP GPY FAG+DA+RGLAT +
Sbjct: 105 LEQLRQYDGSRNPRILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164
Query: 391 -NDEYDDVSDLGSDEIASAIEWEEQFRGKYGIVGRLLKLGE 510
DEYDD+SDL + ++ S EWE QF+ KY VGRLLK GE
Sbjct: 165 LRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 205
>BC016692-1|AAH16692.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 109 bits (261), Expect = 1e-23
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Frame = +1
Query: 217 VEEIRRNSA*R--KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASE 390
+E++R+ R + LLAVNG +FDVT+G +FYGP GPY FAG+DA+RGLAT +
Sbjct: 105 LEQLRQYDGSRNPRILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164
Query: 391 -NDEYDDVSDLGSDEIASAIEWEEQFRGKYGIVGRLLKLGE 510
DEYDD+SDL + ++ S EWE QF+ KY VGRLLK GE
Sbjct: 165 LRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 205
>AJ002030-1|CAA05152.1| 223|Homo sapiens progresterone binding
protein protein.
Length = 223
Score = 109 bits (261), Expect = 1e-23
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Frame = +1
Query: 217 VEEIRRNSA*R--KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASE 390
+E++R+ R + LLAVNG +FDVT+G +FYGP GPY FAG+DA+RGLAT +
Sbjct: 105 LEQLRQYDGSRNPRILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164
Query: 391 -NDEYDDVSDLGSDEIASAIEWEEQFRGKYGIVGRLLKLGE 510
DEYDD+SDL + ++ S EWE QF+ KY VGRLLK GE
Sbjct: 165 LRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 205
>Y12711-1|CAA73248.1| 195|Homo sapiens putative progesterone
binding protein protein.
Length = 195
Score = 100 bits (239), Expect = 5e-21
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 LLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV-AASENDEYDDVSDLGSDE 432
L+A+NG +FDVT+G++FYGP GPY FAG+DA+RGLAT + + DEYDD+SDL + +
Sbjct: 90 LMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQ 149
Query: 433 IASAIEWEEQFRGKYGIVGRLLKLGERQKI 522
+ +WE QF KY VG+LLK GE +
Sbjct: 150 QETLSDWESQFTFKYHHVGKLLKEGEEPTV 179
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 74 TSPLNLVLIGVIVYLIYKIIKSN---FESEANVXXXXXXXXKLRKDLTVAELKKYDGTQP 244
TSPLNL+L+G+ ++L+YKI++ + +++ R+D T AEL+++DG Q
Sbjct: 27 TSPLNLLLLGLCIFLLYKIVRGDQPAASGDSDDDEPPPLPRLKRRDFTPAELRRFDGVQ- 85
Query: 245 DGRV 256
D R+
Sbjct: 86 DPRI 89
>DQ496104-1|ABF47093.1| 195|Homo sapiens progesterone receptor
membrane component 1 protein.
Length = 195
Score = 100 bits (239), Expect = 5e-21
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 LLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV-AASENDEYDDVSDLGSDE 432
L+A+NG +FDVT+G++FYGP GPY FAG+DA+RGLAT + + DEYDD+SDL + +
Sbjct: 90 LMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQ 149
Query: 433 IASAIEWEEQFRGKYGIVGRLLKLGERQKI 522
+ +WE QF KY VG+LLK GE +
Sbjct: 150 QETLSDWESQFTFKYHHVGKLLKEGEEPTV 179
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 74 TSPLNLVLIGVIVYLIYKIIKSN---FESEANVXXXXXXXXKLRKDLTVAELKKYDGTQP 244
TSPLNL+L+G+ ++L+YKI++ + +++ R+D T AEL+++DG Q
Sbjct: 27 TSPLNLLLLGLCIFLLYKIVRGDQPAASGDSDDDEPPPLPRLKRRDFTPAELRRFDGVQ- 85
Query: 245 DGRV 256
D R+
Sbjct: 86 DPRI 89
>CR456993-1|CAG33274.1| 195|Homo sapiens PGRMC1 protein.
Length = 195
Score = 100 bits (239), Expect = 5e-21
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 LLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV-AASENDEYDDVSDLGSDE 432
L+A+NG +FDVT+G++FYGP GPY FAG+DA+RGLAT + + DEYDD+SDL + +
Sbjct: 90 LMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQ 149
Query: 433 IASAIEWEEQFRGKYGIVGRLLKLGERQKI 522
+ +WE QF KY VG+LLK GE +
Sbjct: 150 QETLSDWESQFTFKYHHVGKLLKEGEEPTV 179
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 74 TSPLNLVLIGVIVYLIYKIIKSN---FESEANVXXXXXXXXKLRKDLTVAELKKYDGTQP 244
TSPLNL+L+G+ ++L+YKI++ + +++ R+D T AEL+++DG Q
Sbjct: 27 TSPLNLLLLGLCIFLLYKIVRGDQPAASGDSDDDEPPPLPRLKRRDFTPAELRRFDGVQ- 85
Query: 245 DGRV 256
D R+
Sbjct: 86 DPRI 89
>BC034238-1|AAH34238.1| 195|Homo sapiens progesterone receptor
membrane component 1 protein.
Length = 195
Score = 100 bits (239), Expect = 5e-21
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 LLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQV-AASENDEYDDVSDLGSDE 432
L+A+NG +FDVT+G++FYGP GPY FAG+DA+RGLAT + + DEYDD+SDL + +
Sbjct: 90 LMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQ 149
Query: 433 IASAIEWEEQFRGKYGIVGRLLKLGERQKI 522
+ +WE QF KY VG+LLK GE +
Sbjct: 150 QETLSDWESQFTFKYHHVGKLLKEGEEPTV 179
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 74 TSPLNLVLIGVIVYLIYKIIKSN---FESEANVXXXXXXXXKLRKDLTVAELKKYDGTQP 244
TSPLNL+L+G+ ++L+YKI++ + +++ R+D T AEL+++DG Q
Sbjct: 27 TSPLNLLLLGLCIFLLYKIVRGDQPAASGDSDDDEPPPLPRLKRRDFTPAELRRFDGVQ- 85
Query: 245 DGRV 256
D R+
Sbjct: 86 DPRI 89
>BC008823-1|AAH08823.1| 172|Homo sapiens neuron derived
neurotrophic factor protein.
Length = 172
Score = 66.5 bits (155), Expect = 8e-11
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +1
Query: 259 LAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDEIA 438
LAV G++FDVT GK FYG G PY+A GKD+TRG+A +++ D D + L + E+
Sbjct: 66 LAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVA--KMSLDPADLTHDTTGLTAKELE 123
Query: 439 SAIE-WEEQFRGKYGIVG 489
+ E + + ++ KY IVG
Sbjct: 124 ALDEVFTKVYKAKYPIVG 141
>AY762102-1|AAX07829.1| 172|Homo sapiens cell growth-inhibiting
protein 47 protein.
Length = 172
Score = 66.5 bits (155), Expect = 8e-11
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +1
Query: 259 LAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDEIA 438
LAV G++FDVT GK FYG G PY+A GKD+TRG+A +++ D D + L + E+
Sbjct: 66 LAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVA--KMSLDPADLTHDTTGLTAKELE 123
Query: 439 SAIE-WEEQFRGKYGIVG 489
+ E + + ++ KY IVG
Sbjct: 124 ALDEVFTKVYKAKYPIVG 141
>AF173937-1|AAD51419.1| 172|Homo sapiens secreted protein of
unknown function protein.
Length = 172
Score = 66.5 bits (155), Expect = 8e-11
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +1
Query: 259 LAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDEIA 438
LAV G++FDVT GK FYG G PY+A GKD+TRG+A +++ D D + L + E+
Sbjct: 66 LAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVA--KMSLDPADLTHDTTGLTAKELE 123
Query: 439 SAIE-WEEQFRGKYGIVG 489
+ E + + ++ KY IVG
Sbjct: 124 ALDEVFTKVYKAKYPIVG 141
>AB126219-1|BAD72063.1| 172|Homo sapiens neudesin protein protein.
Length = 172
Score = 66.5 bits (155), Expect = 8e-11
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +1
Query: 259 LAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDEIA 438
LAV G++FDVT GK FYG G PY+A GKD+TRG+A +++ D D + L + E+
Sbjct: 66 LAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVA--KMSLDPADLTHDTTGLTAKELE 123
Query: 439 SAIE-WEEQFRGKYGIVG 489
+ E + + ++ KY IVG
Sbjct: 124 ALDEVFTKVYKAKYPIVG 141
>BC051697-1|AAH51697.1| 264|Homo sapiens cytochrome b5 domain
containing 2 protein.
Length = 264
Score = 66.1 bits (154), Expect = 1e-10
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +1
Query: 259 LAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDEIA 438
LA+ G ++DV+ G+R Y PG YS FAG+DA+R TG SE DDVSDL + E+
Sbjct: 57 LALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGD--CSEAGLVDDVSDLSAAEML 114
Query: 439 SAIEWEEQFRGKYGIVGRL 495
+ W + Y VGR+
Sbjct: 115 TLHNWLSFYEKNYVCVGRV 133
>BC020263-1|AAH20263.1| 264|Homo sapiens cytochrome b5 domain
containing 2 protein.
Length = 264
Score = 66.1 bits (154), Expect = 1e-10
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +1
Query: 259 LAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDEIA 438
LA+ G ++DV+ G+R Y PG YS FAG+DA+R TG SE DDVSDL + E+
Sbjct: 57 LALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGD--CSEAGLVDDVSDLSAAEML 114
Query: 439 SAIEWEEQFRGKYGIVGRL 495
+ W + Y VGR+
Sbjct: 115 TLHNWLSFYEKNYVCVGRV 133
>AK172844-1|BAD18808.1| 264|Homo sapiens protein ( Homo sapiens
cDNA FLJ24005 fis, clone KAT01883. ).
Length = 264
Score = 66.1 bits (154), Expect = 1e-10
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +1
Query: 259 LAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDEIA 438
LA+ G ++DV+ G+R Y PG YS FAG+DA+R TG SE DDVSDL + E+
Sbjct: 57 LALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGD--CSEAGLVDDVSDLSAAEML 114
Query: 439 SAIEWEEQFRGKYGIVGRL 495
+ W + Y VGR+
Sbjct: 115 TLHNWLSFYEKNYVCVGRV 133
>AK223135-1|BAD96855.1| 172|Homo sapiens SCIRP10-related protein
variant protein.
Length = 172
Score = 64.9 bits (151), Expect = 2e-10
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +1
Query: 259 LAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRGLATGQVAASENDEYDDVSDLGSDEIA 438
LAV G++F+VT GK FYG G PY+A GKD+TRG+A +++ D D + L + E+
Sbjct: 66 LAVKGVVFEVTSGKEFYGRGAPYNALTGKDSTRGVA--KMSLDPADLTHDTTGLTAKELE 123
Query: 439 SAIE-WEEQFRGKYGIVG 489
+ E + + ++ KY IVG
Sbjct: 124 ALDEVFTKVYKAKYPIVG 141
>AJ249131-1|CAB65109.1| 109|Homo sapiens progesterone membrane
binding protein protein.
Length = 109
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 74 TSPLNLVLIGVIVYLIYKIIKSN---FESEANVXXXXXXXXKLRKDLTVAELKKYDGTQP 244
TSPLNL+L+G+ ++L+YKI++ + +++ R+D T AEL+++DG Q
Sbjct: 27 TSPLNLLLLGLCIFLLYKIVRGDQPAASGDSDDDEPPPLPRLKRRDFTPAELRRFDGVQ- 85
Query: 245 DGRV 256
D R+
Sbjct: 86 DPRI 89
Score = 37.9 bits (84), Expect = 0.033
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +1
Query: 256 LLAVNGIIFDVTRGKRFYGP 315
L+A+NG +FDVT+G++FYGP
Sbjct: 90 LMAINGKVFDVTKGRKFYGP 109
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 161 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 197
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AL136082-5|CAI20448.1| 185|Homo sapiens RP1-3J17.2 protein.
Length = 185
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AK021777-1|BAB13893.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ11715 fis, clone HEMBA1005223. ).
Length = 129
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 476 YFPLNCSSHSMAEAISSEPRSLTSSYSSFSDAATCPV 366
+FP +C+S + + P + Y ++S A TCPV
Sbjct: 13 FFPSSCTSPQVESHWPAGPMPIPEQYCNWSPAVTCPV 49
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 125 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 161
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KSLLAVNGIIFDVTRGKRFYGPGGPYSAFAGKDATRG 360
K+LL G DVT G+R YG P S ++G+ + G
Sbjct: 97 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVG 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,980,822
Number of Sequences: 237096
Number of extensions: 1761100
Number of successful extensions: 3545
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3529
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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