Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0027
(691 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 24 1.3
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 23 2.4
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 23 3.1
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 23 3.1
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 7.2
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 9.5
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 21 9.5
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 9.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.5
AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine 3-mon... 21 9.5
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 21 9.5
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 21 9.5
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 9.5
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 111 KSFVSKNSNAPPVSPRLARTMNCPDGDQKRWL 16
+ F+S NAP VSP +++ G +WL
Sbjct: 184 RKFISALVNAPSVSPASLPSISPSGGFLPKWL 215
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 157 FDPRHLIMISHIHNGK 110
F+P H I + H+H K
Sbjct: 103 FNPHHEIKLQHLHQSK 118
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -1
Query: 211 FTFXXRHTSHYIASCWIPFDPRHLIMISHIH 119
FT + + + W HL+ IS IH
Sbjct: 183 FTILNNYLTIVLGETWTSLSVYHLVEISEIH 213
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -1
Query: 211 FTFXXRHTSHYIASCWIPFDPRHLIMISHIH 119
FT + + + W HL+ IS IH
Sbjct: 179 FTILNNYLTIVLGETWTSLSVYHLVEISEIH 209
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 23 LFWSPSGQFIVLANLGLT-GGALEFL 97
L W+P+ F+VL+ G+ G + F+
Sbjct: 118 LLWTPAVIFVVLSKNGIVFAGLIVFI 143
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -2
Query: 111 KSFVSKNSNAPPVSPRLARTMNCPDGDQKRW 19
K F +N + P LA +N P+ K W
Sbjct: 88 KEFFKENYVSRPRRCELAAQLNLPESTIKVW 118
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 176 YVVTGVSSXKCKMDCGYY 229
Y V G + KC D G+Y
Sbjct: 15 YSVLGQENFKCPDDFGFY 32
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 176 YVVTGVSSXKCKMDCGYY 229
Y V G + KC D G+Y
Sbjct: 15 YSVLGQENFKCPDDFGFY 32
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 65 LGLTGGALEFLDTNDFTIMNVADHYQM 145
+GL GG + LD +DF + + Y +
Sbjct: 2155 MGLGGGMIWALDLDDFKNLCGCEEYPL 2181
>AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 290
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 17 NHLFWSPSGQFIVLA 61
NHL P GQF+++A
Sbjct: 210 NHLHIWPRGQFMMIA 224
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 17 NHLFWSPSGQFIVLA 61
NHL P GQF+++A
Sbjct: 210 NHLHIWPRGQFMMIA 224
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 17 NHLFWSPSGQFIVLA 61
NHL P GQF+++A
Sbjct: 210 NHLHIWPRGQFMMIA 224
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 3 RGSHSTIFSGHHLGS 47
R H ++G+HLGS
Sbjct: 77 RPMHQNSYTGYHLGS 91
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,291
Number of Sequences: 336
Number of extensions: 2847
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -