Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0023
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    26   0.98 
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    25   3.0  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.1  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 461 QVRVNCSNFSLTETCGPRGSAREKACIHGKREQNGLN 571
           + +   S F +   CG R     K C +GK + +G+N
Sbjct: 54  KAKTGFSIFRIRVRCGGRKRPVHKGCTYGKPKSHGVN 90


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +2

Query: 251 IFFLLPL*ADEH--TAHLMVSGXFAHGLQQCQGQSQAAAYR 367
           I  LLP   D      HL +S  F+  LQ C    Q   YR
Sbjct: 18  IMALLPTGCDASLDVPHLTLSKSFSRALQDCMEYLQVPGYR 58


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = +3

Query: 510 HVGVRGRKPVSTGSGNKTV*IASTLMYL*LDRRQTSVRVMDCPPLWELIEVAGN 671
           HV   GR P ST    K + +  TL    LDRR    R  + PPL + I V  N
Sbjct: 647 HVIGMGRSPDSTV---KKINLRHTLD---LDRRGLLNRQFNLPPLKDTIAVPNN 694


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,097
Number of Sequences: 2352
Number of extensions: 14883
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)