Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0018
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023855-1|AAZ86776.1|  489|Drosophila melanogaster IP12823p pro...    72   5e-13
AE014297-3728|AAF56406.1|  972|Drosophila melanogaster CG11847-P...    72   5e-13
BT015257-1|AAT94486.1|  988|Drosophila melanogaster LP04173p pro...    28   8.3  
AY058479-1|AAL13708.1|  700|Drosophila melanogaster GH28722p pro...    28   8.3  
AE014296-443|AAF47637.2|  988|Drosophila melanogaster CG1317-PB ...    28   8.3  

>BT023855-1|AAZ86776.1|  489|Drosophila melanogaster IP12823p
           protein.
          Length = 489

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 28/41 (68%), Positives = 37/41 (90%)
 Frame = +2

Query: 107 MKTRFNTYDIICMITELQRLIGMRVNQVYDIDNRTYVIRLQ 229
           MKTRFNT+DIIC + ELQ+L+G RVNQ+YD+DN+TY+ R+Q
Sbjct: 1   MKTRFNTFDIICGVAELQKLVGWRVNQIYDVDNKTYLFRMQ 41



 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 21/28 (75%), Positives = 27/28 (96%)
 Frame = +1

Query: 253 VLESGNRFHTTQFEWPKNVAPSGFTMKV 336
           ++ESG RFHTT+FEWPKN+APSGF+MK+
Sbjct: 52  LIESGTRFHTTRFEWPKNMAPSGFSMKL 79


>AE014297-3728|AAF56406.1|  972|Drosophila melanogaster CG11847-PA
           protein.
          Length = 972

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 28/41 (68%), Positives = 37/41 (90%)
 Frame = +2

Query: 107 MKTRFNTYDIICMITELQRLIGMRVNQVYDIDNRTYVIRLQ 229
           MKTRFNT+DIIC + ELQ+L+G RVNQ+YD+DN+TY+ R+Q
Sbjct: 1   MKTRFNTFDIICGVAELQKLVGWRVNQIYDVDNKTYLFRMQ 41


>BT015257-1|AAT94486.1|  988|Drosophila melanogaster LP04173p
           protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 477 TTNFLTWTF*VLYGQF*TIFKAMLSDTLKDGLSWI 373
           T+ F+ W F ++Y  +   F ++L + L+ G+ WI
Sbjct: 410 TSLFVHWMFGMVYVYYFAAFVSLLREVLRPGVLWI 444


>AY058479-1|AAL13708.1|  700|Drosophila melanogaster GH28722p
           protein.
          Length = 700

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 477 TTNFLTWTF*VLYGQF*TIFKAMLSDTLKDGLSWI 373
           T+ F+ W F ++Y  +   F ++L + L+ G+ WI
Sbjct: 122 TSLFVHWMFGMVYVYYFAAFVSLLREVLRPGVLWI 156


>AE014296-443|AAF47637.2|  988|Drosophila melanogaster CG1317-PB
           protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 477 TTNFLTWTF*VLYGQF*TIFKAMLSDTLKDGLSWI 373
           T+ F+ W F ++Y  +   F ++L + L+ G+ WI
Sbjct: 410 TSLFVHWMFGMVYVYYFAAFVSLLREVLRPGVLWI 444


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,643,979
Number of Sequences: 53049
Number of extensions: 514326
Number of successful extensions: 1045
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)