Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0015
(431 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 120 2e-27
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 120 2e-27
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 120 2e-27
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 120 2e-27
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 120 2e-27
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 120 2e-27
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 120 2e-27
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 50 3e-06
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 120 bits (289), Expect = 2e-27
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +3
Query: 48 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 227
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 7 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 66
Query: 228 FLWSKGVRNFP 260
+W+KG+RN P
Sbjct: 67 AVWAKGIRNVP 77
Score = 52.0 bits (119), Expect = 8e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 242 GSQKFPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 385
G + P+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 72 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 120 bits (289), Expect = 2e-27
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +3
Query: 48 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 227
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 228 FLWSKGVRNFP 260
+W+KG+RN P
Sbjct: 71 AVWAKGIRNVP 81
Score = 52.0 bits (119), Expect = 8e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 242 GSQKFPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 385
G + P+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 120 bits (289), Expect = 2e-27
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +3
Query: 48 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 227
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 228 FLWSKGVRNFP 260
+W+KG+RN P
Sbjct: 71 AVWAKGIRNVP 81
Score = 52.0 bits (119), Expect = 8e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 242 GSQKFPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 385
G + P+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 120 bits (289), Expect = 2e-27
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +3
Query: 48 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 227
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 228 FLWSKGVRNFP 260
+W+KG+RN P
Sbjct: 71 AVWAKGIRNVP 81
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 242 GSQKFPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIK 361
G + P+ N+DEDS +KL+TLVTYVPV + K
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 120 bits (289), Expect = 2e-27
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +3
Query: 48 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 227
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 228 FLWSKGVRNFP 260
+W+KG+RN P
Sbjct: 71 AVWAKGIRNVP 81
Score = 52.0 bits (119), Expect = 8e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 242 GSQKFPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 385
G + P+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 120 bits (289), Expect = 2e-27
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +3
Query: 48 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 227
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 228 FLWSKGVRNFP 260
+W+KG+RN P
Sbjct: 71 AVWAKGIRNVP 81
Score = 52.0 bits (119), Expect = 8e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 242 GSQKFPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 385
G + P+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 120 bits (289), Expect = 2e-27
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = +3
Query: 48 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 227
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 228 FLWSKGVRNFP 260
+W+KG+RN P
Sbjct: 71 AVWAKGIRNVP 81
Score = 52.0 bits (119), Expect = 8e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 242 GSQKFPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 385
G + P+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 50.4 bits (115), Expect = 3e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 293 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 385
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 15 NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,561,750
Number of Sequences: 237096
Number of extensions: 972455
Number of successful extensions: 1566
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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