Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0011
         (360 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    20   8.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   8.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.8  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 267 SYITTSVPFFG 299
           S +T SVPF+G
Sbjct: 240 SKVTLSVPFYG 250


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 68  FCIYFEKMAFIQNCHLFNWD 9
           F  Y+E    +QN   + WD
Sbjct: 367 FLAYYEVCELLQNGATYIWD 386


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 3   KLIPIKKVAVLDKSHFLKIYAKVWICICLS 92
           KL+  K  +V+     L   A VWIC  ++
Sbjct: 713 KLLLFKITSVMIAVSGLVYIATVWICTLMN 742


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,887
Number of Sequences: 336
Number of extensions: 1574
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)