Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0005
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      24   0.77 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   4.1  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   5.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   5.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   5.4  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 0.77
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 125 RFLKFTYKLKSNIMCKPC 178
           +F+K T K     MC+PC
Sbjct: 113 KFIKVTTKAPLECMCRPC 130


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 99  IPVNGTRXRKKNVTFA 52
           +PVNG    K N+TF+
Sbjct: 210 LPVNGVTSEKCNLTFS 225


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 119 CFRFLKFTYKLKSNIMCKPCRLYR 190
           CF   KF     S+I  KP +LY+
Sbjct: 9   CFYVAKFFAITPSSIYDKPTKLYQ 32


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 104 IQFPLMERXLEKKT*HSLKYNEIPSIGHGTD 12
           +QF L+E  L  +  + +KYN+  S   G D
Sbjct: 76  LQFRLLENKLGVRQENRVKYNQNYSKVFGND 106


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 104 IQFPLMERXLEKKT*HSLKYNEIPSIGHGTD 12
           +QF L+E  L  +  + +KYN+  S   G D
Sbjct: 136 LQFRLLENKLGVRQENRVKYNQNYSKVFGND 166


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 104 IQFPLMERXLEKKT*HSLKYNEIPSIGHGTD 12
           +QF L+E  L  +  + +KYN+  S   G D
Sbjct: 136 LQFRLLENKLGVRQENRVKYNQNYSKVFGND 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,232
Number of Sequences: 336
Number of extensions: 2002
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)