Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0004
(520 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 2e-22
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 5e-15
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 54 9e-08
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 49 3e-06
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 8e-05
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.001
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.002
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 39 0.002
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.002
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 38 0.004
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.009
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.015
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.046
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.046
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 34 0.061
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.081
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.11
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.14
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 32 0.25
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.33
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.57
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.00
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.00
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.3
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 1.7
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 1.7
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 29 2.3
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 29 3.0
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 29 3.0
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 4.0
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 4.0
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 5.3
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 7.0
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 7.0
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 102 bits (244), Expect = 2e-22
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 GISAAVSKTAVXPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 431
G +A +SKTA PIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN
Sbjct: 17 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGN 76
Query: 432 FANVIRYFPTQALNFAFKDKYKQVF 506
AN IRYFPTQALNFAFKD+ K +F
Sbjct: 77 LANCIRYFPTQALNFAFKDQVKALF 101
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +3
Query: 357 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 509
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 77.8 bits (183), Expect = 5e-15
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = +3
Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
GI+ AVS+T+V P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN
Sbjct: 42 GIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNG 95
Query: 435 ANVIRYFPTQALNFAFKDKYKQ 500
NVIR FP A+ FA ++YK+
Sbjct: 96 TNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/85 (41%), Positives = 49/85 (57%)
Frame = +3
Query: 249 GWGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 428
G G A VS+TA P++R+K+LLQVQ A+ GIV F + +E G+ S WRG
Sbjct: 142 GGGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRG 195
Query: 429 NFANVIRYFPTQALNFAFKDKYKQV 503
N ANVI+ P + F +K K++
Sbjct: 196 NGANVIKIAPESGIKFFAYEKAKKL 220
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/84 (23%), Positives = 45/84 (53%)
Frame = +3
Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F
Sbjct: 239 MAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFP 291
Query: 438 NVIRYFPTQALNFAFKDKYKQVFL 509
+++ P ++ A + K +L
Sbjct: 292 SLLGIIPYAGIDLAVYETLKNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 53.6 bits (123), Expect = 9e-08
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 GISAAVSKTAVXPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 425
G +A +SKTA PIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 18 GAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +3
Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
G SA ++++ P+E VK+L QV + G++ F + K +G+ +FW+GN
Sbjct: 66 GTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGNG 118
Query: 435 ANVIRYFPTQALNFA 479
+ IR FP A+ +A
Sbjct: 119 VSCIRLFPYSAVQYA 133
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +3
Query: 261 SAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 440
S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G +
Sbjct: 162 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPS 218
Query: 441 VIRYFP 458
+ FP
Sbjct: 219 FLGLFP 224
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +3
Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 438 NVIRYFPTQALNFAFKDKYKQVF 506
++ P +A+ D + +F
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIF 1002
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +3
Query: 357 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 500
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +3
Query: 285 VXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 464
+ P++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 465 ALNF 476
A+ F
Sbjct: 110 AVYF 113
Score = 34.7 bits (76), Expect = 0.046
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
G + VS + P + +K +Q + RYKG++D ++ KE+G++ F RG +
Sbjct: 140 GFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCALQSYKEEGMIVFTRGIW 195
Query: 435 ANVIRYFPTQALNF 476
++R F Q L F
Sbjct: 196 PTLLRGF-LQVLRF 208
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 342 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 506
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 261 SAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 428
S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 431 STLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Frame = +3
Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQG 407
GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G
Sbjct: 22 GIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEG 81
Query: 408 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 506
+ + ++G + R ++ D+ K ++
Sbjct: 82 MKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +3
Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
IS + A P++ K +Q + I YKG +D RI + +G+ + W+G
Sbjct: 102 ISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTP 158
Query: 438 NVIRYFPTQALNFAFKDK 491
R P L F F ++
Sbjct: 159 YYFRIGPHTVLTFIFLEQ 176
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 360 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLA 512
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L+
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLLS 85
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 258 ISAAVSKTAVXPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 428
+S +SK + P + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 38 LSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +3
Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
GI+ +S P++ VK Q + +Y G D +I G+ +F +G
Sbjct: 365 GIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLL 424
Query: 435 ANVIRYFPTQA 467
A ++R FPT A
Sbjct: 425 ATILRGFPTNA 435
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 369 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 503
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.026
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 372 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 497
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 34.7 bits (76), Expect = 0.046
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 GISAAVSKTAVX-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 431
G+S+ V +A+ P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 121 GVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTGM 176
Query: 432 FANVIRYFPTQALNFAFKDKYKQVFLAA 515
V R D K + L A
Sbjct: 177 KPTVKRAACISGTQIPTYDHTKHLLLNA 204
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +3
Query: 150 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGWGISAAVSKTAVXPIERVKLLLQV 323
AA + T P+ DH + N E R G V L ++ V+ P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 324 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 449
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.7 bits (76), Expect = 0.046
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 291 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 470
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 471 NFAFKDKYKQV 503
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 34.3 bits (75), Expect = 0.061
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 291 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 428
P ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 180 PTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.081
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 390 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 503
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = +3
Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
+S + A P++ +K+ LQ + K +KG +D F++ + +GL ++G +
Sbjct: 29 VSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLS 87
Query: 438 NVIRYFPTQALNF 476
++ P+ AL F
Sbjct: 88 PLLMATPSTALTF 100
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 GISAAVSKTA-VXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 431
G +A V TA P++ V+ L VQ +S + ++ Y GIV A RI E+G+ ++G
Sbjct: 35 GATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLYKGL 92
Query: 432 FANVIRYFP 458
+++ P
Sbjct: 93 VPSLVSIAP 101
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 214 LAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVP 270
Query: 438 NVIRYFP 458
+I P
Sbjct: 271 RMIVIAP 277
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 390 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 503
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 258 ISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 437
I+ + + P++RVK +LQ++ + Y G VD RI +E G+ ++G
Sbjct: 146 IAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISV 201
Query: 438 NVIRYFP 458
+R P
Sbjct: 202 TAMRDIP 208
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +3
Query: 261 SAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 440
+ A + P++ +K+ LQ + K YK D F +I + +G+ +RG
Sbjct: 48 AGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVP 106
Query: 441 VIRYFPTQALNFA 479
++ P + F+
Sbjct: 107 ILNSIPNTTVLFS 119
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 246 PGWGISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 425
P G+S +KT P+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 60 PPLGLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 30.7 bits (66), Expect = 0.75
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 255 GISAAVSKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 434
GI+ + P E VK LQ+ + AA Y+G +D + K G+L +RG
Sbjct: 48 GIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLS 103
Query: 435 ANVIRYFPTQALNFA 479
+ + P ++ FA
Sbjct: 104 SLLYGSVPKASVRFA 118
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 30.3 bits (65), Expect = 1.00
Identities = 22/102 (21%), Positives = 43/102 (42%)
Frame = +3
Query: 171 YSPSEDHIIEQNVEPRRSGRVR*GLPGWGISAAVSKTAVXPIERVKLLLQVQHVSKQIAA 350
Y + +++ + + RR V + GIS ++ + P E + L+ Q +
Sbjct: 911 YERLKAELLKLHYKSRRDFHVVECMLAAGISKCIATSLCYPHEVARTRLRQQE--SEFLG 968
Query: 351 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 476
Q+Y+ + +E+G + G +VIR P A+ F
Sbjct: 969 RQKYRSFFQTLGTVLREEGWRGLYGGLGTHVIRQVPNTAIMF 1010
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.3 bits (65), Expect = 1.00
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 291 PIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 458
P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 126 PAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 366 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 503
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 311 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 412
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 311 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 412
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 282 AVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 461
A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 462 QALNF 476
Q L+F
Sbjct: 66 QTLHF 70
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 311 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 412
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 311 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 412
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 273 SKTAVXPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 431
S+ V ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 390 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLAA 515
+P+E L + G ++VI F A+N F+++YK+VF A
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIA 304
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 393 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 509
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 390 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 503
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 311 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 412
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 39 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 182
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 87 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 197
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 66 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 188
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,379,941
Number of Sequences: 59808
Number of extensions: 317487
Number of successful extensions: 841
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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