Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--1000.Seq
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   3.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   4.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   5.4  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   5.4  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   7.2  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 512 LSHSRKKHNSYHHSHAH 462
           L+HS   H  +HH H H
Sbjct: 494 LTHSHHAHPHHHHHHHH 510



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 509 SHSRKKHNSYHHSHAH 462
           SH    H+ +HH H H
Sbjct: 497 SHHAHPHHHHHHHHHH 512


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 316 LLHASDGGYEPHHERC 269
           + H  D   E HHERC
Sbjct: 476 MAHVKDAREEKHHERC 491


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 521 HLRLSHSRKKHNSYHHSHAH 462
           H    H +  H ++HH H H
Sbjct: 270 HPSSQHQQPTHQTHHHHHHH 289


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 521 HLRLSHSRKKHNSYHHSHAH 462
           H    H +  H ++HH H H
Sbjct: 270 HPSSQHQQPTHQTHHHHHHH 289


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 65   TFNRPFEAIAGQNASASTNGGTHFCTFTRIFTVAAFFCYCTNTSANSC 208
            TF+RPFE++A      +T+      +F+  +    F  +C+  S+NSC
Sbjct: 1590 TFDRPFESVA-LRFVYNTSVDDSKLSFS--WNGQEFNLFCSTGSSNSC 1634


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 521 HLRLSHSRKKHNSYHHSHAH 462
           H    H +  H ++HH H H
Sbjct: 222 HPSSQHQQPTHQTHHHHHHH 241


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 41  TTRTANHGTFNRPFEAIAGQNASAS 115
           +T  A +GT +  F A+AG NAS++
Sbjct: 29  STGPAGNGTGSGGFGALAGSNASSA 53


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -3

Query: 505 IHVKNIIPIITATLILNYLNNSERSLVK 422
           +H+ N + + + T +  Y+N+S  +LV+
Sbjct: 482 LHILNTVYLYSPTFVYQYVNSSGIALVQ 509


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,848
Number of Sequences: 2352
Number of extensions: 10443
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)