Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0997.Seq
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 142 5e-35
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 103 3e-23
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 100 2e-22
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 99 3e-22
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 91 2e-19
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 88 1e-18
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 88 1e-18
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 86 4e-18
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 86 4e-18
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 85 8e-18
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 84 2e-17
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 80 2e-16
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 78 1e-15
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 78 1e-15
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 76 4e-15
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 74 2e-14
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 73 5e-14
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 72 6e-14
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 72 8e-14
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 65 7e-12
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 40 3e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 33 0.027
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 33 0.027
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 33 0.027
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 33 0.036
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 30 0.34
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 30 0.34
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.45
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 29 0.59
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 28 1.0
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 28 1.4
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 1.4
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 27 2.4
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 27 2.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.1
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 26 4.2
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 26 5.5
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 26 5.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 5.5
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 5.5
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 26 5.5
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 7.3
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 25 9.6
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 25 9.6
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 142 bits (343), Expect = 5e-35
Identities = 64/80 (80%), Positives = 73/80 (91%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
EL+E VQ PV + +KFL+FG+ PS+GVLF+GPPG GKTLLAKAIANEC ANFISVKGPEL
Sbjct: 508 ELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPEL 567
Query: 196 LTMWFGESEANVRDIFDKAR 255
L+MWFGESE+NVRDIFDKAR
Sbjct: 568 LSMWFGESESNVRDIFDKAR 587
Score = 116 bits (280), Expect = 2e-27
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +3
Query: 255 SASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPD 434
+A+PCV+F DELDSIAK V+NQ+LTEMDG+ +KKNVF+IGATNRPD
Sbjct: 588 AAAPCVVFLDELDSIAKARGASAGDSGGGDR-VVNQLLTEMDGVNSKKNVFVIGATNRPD 646
Query: 435 IIDPAILRPGRLDQLIYIPLPDEKS 509
IDPA++RPGRLDQLIY+PLPDE++
Sbjct: 647 QIDPALMRPGRLDQLIYVPLPDEEA 671
Score = 96.3 bits (229), Expect = 3e-21
Identities = 39/82 (47%), Positives = 60/82 (73%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
+++ELV+ P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+
Sbjct: 235 QIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEI 294
Query: 196 LTMWFGESEANVRDIFDKARRH 261
++ GESE+N+R F++A ++
Sbjct: 295 MSKMAGESESNLRKAFEEAEKN 316
Score = 70.1 bits (164), Expect = 3e-13
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +3
Query: 261 SPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDII 440
SP ++F DE+DSIA V++Q+LT MDGM A+ NV ++ ATNRP+ I
Sbjct: 317 SPAIIFIDEIDSIAPKREKTNGEVERR---VVSQLLTLMDGMKARSNVVVMAATNRPNSI 373
Query: 441 DPAILRPGRLDQLIYIPLPD 500
DPA+ R GR D+ + + +PD
Sbjct: 374 DPALRRFGRFDREVDVGIPD 393
Score = 57.2 bits (132), Expect = 2e-09
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +2
Query: 488 PAAGREVREAILRANLRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRACKLGIR 652
P E R +IL+ LR +P+A+DVDL +AK T GFSGA+ + QRA KL I+
Sbjct: 665 PLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIK 719
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 509 REAILRANLRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRACKLGIR 652
R ILR + + +A DVDL IA T G+ G++ +C A IR
Sbjct: 397 RLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIR 444
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 103 bits (246), Expect = 3e-23
Identities = 46/79 (58%), Positives = 62/79 (78%)
Frame = +1
Query: 19 LQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 198
L++ +Q P++ P+ F + G++P GVL YGPPG GKTLLAKA+A E F+S+KGPELL
Sbjct: 667 LRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELL 725
Query: 199 TMWFGESEANVRDIFDKAR 255
M+ GESEANVR++F+KAR
Sbjct: 726 NMYVGESEANVRNVFEKAR 744
Score = 85.0 bits (201), Expect = 8e-18
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Frame = +3
Query: 255 SASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKN--VFIIGATNR 428
++SPCV+FFDELDSIA V++Q+L E+D + N VF+IGATNR
Sbjct: 745 NSSPCVIFFDELDSIAPHRGNSSDSGNVMDR-VVSQLLAELDSISKDNNKYVFVIGATNR 803
Query: 429 PDIIDPAILRPGRLDQLIYIPLPDEKSARPS 521
PD++DP++LRPGR D+L+Y+ + + ++ S
Sbjct: 804 PDLLDPSLLRPGRFDKLVYLGINKSEESKAS 834
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 100 bits (240), Expect = 2e-22
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +1
Query: 13 VELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 192
VELQ + P++ P+ + G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS++GPE
Sbjct: 502 VELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPE 561
Query: 193 LLTMWFGESEANVRDIFDKAR 255
LL + GESE VR +F +AR
Sbjct: 562 LLNKYVGESERAVRQVFLRAR 582
Score = 93.5 bits (222), Expect = 2e-20
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
EL ELV P++HP+ + G+ P RGVL +GPPGCGKT+LA A+ANE FIS+ P +
Sbjct: 185 ELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSI 244
Query: 196 LTMWFGESEANVRDIFDKAR 255
++ GESE VR++F++A+
Sbjct: 245 VSGMSGESEKKVREVFEEAK 264
Score = 88.2 bits (209), Expect = 9e-19
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = +3
Query: 255 SASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPD 434
++SPCV+FFDELD++ V+N +LTE+DG+ + V++I ATNRPD
Sbjct: 583 ASSPCVIFFDELDAMVPRRDDSLSEASSR---VVNTLLTELDGLSDRSGVYVIAATNRPD 639
Query: 435 IIDPAILRPGRLDQLIYIPLPD 500
IIDPA+LRPGRLD+ + + LPD
Sbjct: 640 IIDPAMLRPGRLDKTLLVDLPD 661
Score = 56.8 bits (131), Expect = 3e-09
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Frame = +3
Query: 246 QGSSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKN----VFII 413
+ S +PC++F DE+D++ ++ Q LT MD + +K V +I
Sbjct: 262 EAKSLAPCLMFIDEIDAVTPKRESAQREMERR---IVAQFLTCMDELSFEKTDGKPVLVI 318
Query: 414 GATNRPDIIDPAILRPGRLDQLIYIPLPDEKSARPSCAPTFA 539
GATNRPD +D A+ R GR D+ I + +P + AR T A
Sbjct: 319 GATNRPDSLDSALRRAGRFDREICLTVPSQ-DAREKILRTMA 359
Score = 31.5 bits (68), Expect = 0.11
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 500 REVREAILRANLRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRACKLGIRR 655
++ RE ILR + ++ D D +AK T G+ GA+ + A + I+R
Sbjct: 348 QDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKR 399
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 99 bits (238), Expect = 3e-22
Identities = 44/81 (54%), Positives = 59/81 (72%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
+L+E V++P+ H + F + G++P +GVL YGPPGC KT+ AKAIA E NFI+VKGPEL
Sbjct: 559 KLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPEL 618
Query: 196 LTMWFGESEANVRDIFDKARR 258
+ GESE VR +F KAR+
Sbjct: 619 FDKFVGESERAVRQVFQKARQ 639
Score = 84.2 bits (199), Expect = 1e-17
Identities = 33/82 (40%), Positives = 56/82 (68%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
+++++V+ P ++P+ F F + P RGVL YGPPG GKT++ +A+A E A ++ GP +
Sbjct: 290 QIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSV 349
Query: 196 LTMWFGESEANVRDIFDKARRH 261
+ + GE+E+ +R IF+ AR H
Sbjct: 350 VGKYLGETESRLRKIFEDARAH 371
Score = 77.8 bits (183), Expect = 1e-15
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +3
Query: 258 ASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDI 437
ASP V+FFDE+D++ V+ +L E+DG+ A +NV ++ ATNRPD+
Sbjct: 640 ASPSVIFFDEIDALTANRGEDNSSDR-----VVAALLNELDGIEALRNVLVLAATNRPDM 694
Query: 438 IDPAILRPGRLDQLIYIPLPD 500
IDPA++RPGRLD+L+Y+ P+
Sbjct: 695 IDPALMRPGRLDRLLYVGPPN 715
Score = 60.1 bits (139), Expect = 3e-10
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = +3
Query: 264 PCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIID 443
P ++F DE+D++A + +LT +DGM V +I ATNRP+ ID
Sbjct: 373 PSIIFIDEIDALAPKRTEDVSEAESR---AVATLLTLLDGMANAGKVVVIAATNRPNSID 429
Query: 444 PAILRPGRLDQLIYIPLPDEKSAR 515
A+ RPGRL++ I I +PD KSAR
Sbjct: 430 EALRRPGRLEKEIEIGIPD-KSAR 452
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +2
Query: 503 EVREAILRANLRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRA 634
E R+ I++ K A+DVDL IA+ T+G SGAE +CQ A
Sbjct: 717 EARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEA 760
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 90.6 bits (215), Expect = 2e-19
Identities = 44/83 (53%), Positives = 56/83 (67%)
Frame = +3
Query: 258 ASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDI 437
A PCVLFFDE DS+A V+NQILT+MDG + V+I+ AT RPD+
Sbjct: 698 AKPCVLFFDEFDSVAPRRGQDSTGVTDR---VVNQILTQMDGAESLDGVYIVAATTRPDM 754
Query: 438 IDPAILRPGRLDQLIYIPLPDEK 506
IDPA+LRPGRLD+LI+ LP+E+
Sbjct: 755 IDPALLRPGRLDKLIFCDLPNEE 777
Score = 74.1 bits (174), Expect = 2e-14
Identities = 32/79 (40%), Positives = 54/79 (68%)
Frame = +1
Query: 19 LQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 198
++++++ PV++ + + ++ G+L +G PGCGKT LA AI++ FIS+KGPELL
Sbjct: 618 VRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELL 677
Query: 199 TMWFGESEANVRDIFDKAR 255
+ G+SE VRD+F +A+
Sbjct: 678 DKYIGKSEQGVRDLFSRAQ 696
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 87.8 bits (208), Expect = 1e-18
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +1
Query: 19 LQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 198
L+E+V+ P+ P++F+K G+ P +G++ YGPPG GKTL A+A+AN A FI V G EL+
Sbjct: 191 LREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELV 250
Query: 199 TMWFGESEANVRDIFDKARRHLRAC 273
+ GE VR++F+ AR +AC
Sbjct: 251 QKYVGEGARMVRELFEMARTK-KAC 274
Score = 65.3 bits (152), Expect = 7e-12
Identities = 26/78 (33%), Positives = 47/78 (60%)
Frame = +3
Query: 267 CVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDP 446
C++FFDE+D+I + +++T++DG + N+ ++ ATNRP+ +D
Sbjct: 274 CIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDE 333
Query: 447 AILRPGRLDQLIYIPLPD 500
A++RPGR+D+ + LPD
Sbjct: 334 ALMRPGRIDRKVEFGLPD 351
Score = 31.1 bits (67), Expect = 0.15
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 503 EVREAILRANLRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRACKLGIR 652
E R ILR + + I KD+ IA++ +GAE +C A IR
Sbjct: 353 EGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIR 402
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 87.8 bits (208), Expect = 1e-18
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
E++E+++ PV+HP+ F G+ +G+L YGPPG GKTLLA+A+A+ FI V G EL
Sbjct: 156 EIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSEL 215
Query: 196 LTMWFGESEANVRDIFDKARRH 261
+ + GE VR++F AR H
Sbjct: 216 VQKYIGEGSRMVRELFVMAREH 237
Score = 66.1 bits (154), Expect = 4e-12
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 SPCVLFFDELDSI-AKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDI 437
+P ++F DE+DSI + + ++L ++DG A KN+ +I ATNR DI
Sbjct: 238 APSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI 297
Query: 438 IDPAILRPGRLDQLIYIPLPDEKS 509
+DPA+LRPGR+D+ I P P ++
Sbjct: 298 LDPALLRPGRIDRKIEFPPPSAEA 321
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 488 PAAGREVREAILRANLRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRACKLGIR 652
P E R ILR + R + + +DL IA+ G SGAE +C A +R
Sbjct: 315 PPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALR 369
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 86.2 bits (204), Expect = 4e-18
Identities = 40/85 (47%), Positives = 53/85 (62%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
E++E V+ P+ D + + G+ P RGVL YGPPG GKT+L KA+AN ANFI V G E
Sbjct: 145 EVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEF 204
Query: 196 LTMWFGESEANVRDIFDKARRHLRA 270
+ + GE VRD+F AR + A
Sbjct: 205 VQKYLGEGPRMVRDVFRMARENAPA 229
Score = 68.9 bits (161), Expect = 6e-13
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = +3
Query: 261 SPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDII 440
+P ++F DE+D+IA ++ ++LT+MDG NV +I ATNR D +
Sbjct: 227 APAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTL 286
Query: 441 DPAILRPGRLDQLIYIP 491
DPA+LRPGRLD+ I P
Sbjct: 287 DPALLRPGRLDRKIEFP 303
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 86.2 bits (204), Expect = 4e-18
Identities = 36/82 (43%), Positives = 55/82 (67%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
E++E V+ P+ HP+ + + G++P +GV+ YG PG GKTLLAKA+AN+ A F+ V G EL
Sbjct: 202 EIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSEL 261
Query: 196 LTMWFGESEANVRDIFDKARRH 261
+ + G+ VR +F+ A H
Sbjct: 262 IQKYLGDGPRLVRQLFNAAEEH 283
Score = 58.4 bits (135), Expect = 8e-10
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 SPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMG-AKKNVFIIGATNRPDI 437
SP ++F DE+D+I + ++L ++DG +++++ +I ATNR
Sbjct: 284 SPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISD 343
Query: 438 IDPAILRPGRLDQLIYIPLPDEKSAR 515
+DPA++RPGR+D+ I PDE + R
Sbjct: 344 LDPALIRPGRIDRKILFENPDEATKR 369
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 85.0 bits (201), Expect = 8e-18
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
EL+E+++ P+++P+ FL+ G++P +GVL YGPPG GKTLLA+A+A NF+ V +
Sbjct: 143 ELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAI 202
Query: 196 LTMWFGESEANVRDIFDKARRH 261
+ + GES +R++F A+ H
Sbjct: 203 VDKYIGESARIIREMFGYAKEH 224
Score = 74.9 bits (176), Expect = 9e-15
Identities = 36/80 (45%), Positives = 47/80 (58%)
Frame = +3
Query: 264 PCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIID 443
PCV+F DE+D+I + ++L +MDG II ATNRPD +D
Sbjct: 226 PCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLD 285
Query: 444 PAILRPGRLDQLIYIPLPDE 503
PA+LRPGRLD+ I IPLP+E
Sbjct: 286 PALLRPGRLDRKIEIPLPNE 305
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 83.8 bits (198), Expect = 2e-17
Identities = 38/85 (44%), Positives = 59/85 (69%), Gaps = 5/85 (5%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-----QANFISV 180
+L+E+V P+ +P+ F +F MQP RGVLF+GPPG GKTL+A+A+A C + +F
Sbjct: 277 QLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMR 336
Query: 181 KGPELLTMWFGESEANVRDIFDKAR 255
KG + L+ W GE+E +R +F++A+
Sbjct: 337 KGADCLSKWVGEAERQLRLLFEEAK 361
Score = 78.6 bits (185), Expect = 7e-16
Identities = 36/90 (40%), Positives = 52/90 (57%)
Frame = +3
Query: 246 QGSSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATN 425
+ S P ++FFDE+D +A +++ +L MDGM ++ V IIGATN
Sbjct: 359 EAKSTQPSIIFFDEIDGLAPVRSSKQEQIHAS---IVSTLLALMDGMESRGQVIIIGATN 415
Query: 426 RPDIIDPAILRPGRLDQLIYIPLPDEKSAR 515
RPD +DPA+ RPGR D+ Y PLPD + +
Sbjct: 416 RPDAVDPALRRPGRFDREFYFPLPDRDARK 445
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 80.2 bits (189), Expect = 2e-16
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Frame = +1
Query: 13 VELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-----QANFIS 177
++L+E+V P+ +P+ FL + P RGVLF+GPPG GKTL+A+ +A C + +F
Sbjct: 382 LQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFL 441
Query: 178 VKGPELLTMWFGESEANVRDIFDKARR 258
KG + L+ W GE+E +R +F++ARR
Sbjct: 442 RKGSDCLSKWVGEAERQLRLLFEEARR 468
Score = 69.7 bits (163), Expect = 3e-13
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +3
Query: 264 PCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIID 443
P ++FFDE+D +A +++ +L MDG+ + V +IGATNRP+ +D
Sbjct: 471 PSIIFFDEIDGLAPIRSSKQEQTHSS---IVSTLLALMDGLDTRGQVVVIGATNRPNDLD 527
Query: 444 PAILRPGRLDQLIYIPLPDEKS 509
PA+ RPGR D+ Y PLP++++
Sbjct: 528 PALRRPGRFDREFYFPLPNKQA 549
Score = 32.7 bits (71), Expect = 0.048
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 488 PAAGREVREAILRAN-LRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRACKLGIRR 655
P ++ R IL N L SP + L ++A+ T G+ GA+ +C A +RR
Sbjct: 543 PLPNKQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVRR 599
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 78.2 bits (184), Expect = 1e-15
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
EL E + P++ DKF K G++P +G L +GPPG GKTLLA+A A + A F+ + P+L
Sbjct: 196 ELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQL 255
Query: 196 LTMWFGESEANVRDIFDKAR 255
+ M+ G+ VRD F A+
Sbjct: 256 VQMFIGDGAKLVRDAFALAK 275
Score = 68.1 bits (159), Expect = 1e-12
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = +3
Query: 261 SPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDII 440
SP ++F DELD+I + ++L ++DG + V +I ATNR D +
Sbjct: 278 SPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTL 337
Query: 441 DPAILRPGRLDQLIYIPLPDEKS 509
DPA+LR GRLD+ + PLP+E++
Sbjct: 338 DPALLRSGRLDRKLEFPLPNEEA 360
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 488 PAAGREVREAILRANLRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRACKLGIRR 655
P E R ILR + RK I D++ +A+ T ++GA +C A + +R+
Sbjct: 354 PLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQ 409
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 77.8 bits (183), Expect = 1e-15
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = +1
Query: 19 LQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 198
L+E V P++ P F G +P G+L YGPPG GK+ LAKA+A E + F S+ +L+
Sbjct: 141 LKETVLLPIKLPQLF-SHGRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLV 199
Query: 199 TMWFGESEANVRDIFDKAR 255
+ W GESE VR +F+ AR
Sbjct: 200 SKWMGESERLVRQLFEMAR 218
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +3
Query: 264 PCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGA-KKNVFIIGATNRPDII 440
P ++F DE+DS+ + + L +M+G+G + V ++GATN P +
Sbjct: 222 PSIIFIDEIDSLC---GSRSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTL 278
Query: 441 DPAILRPGRLDQLIYIPLPD 500
D AI R R ++ IYIPLP+
Sbjct: 279 DSAIRR--RFEKRIYIPLPN 296
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 488 PAAGREVREAILRANLRKSPIA-KDVDLSYIAKVTQGFSGAEXTEICQRACKLGIRR 655
P R + N+ K P D +AK+T G+SG++ + + + A +RR
Sbjct: 293 PLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRR 349
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 76.2 bits (179), Expect = 4e-15
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 SPCVLFFDELDSIAKXXXXXXXXXXXXXXX-VINQILTEMDGMGAKKNVFIIGATNRPDI 437
+PC++F DE+D+I K +NQ+L EMDG + +++ + TNRPD+
Sbjct: 388 APCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDV 447
Query: 438 IDPAILRPGRLDQLIYIPLPD 500
+DPA+LRPGR D+ I I PD
Sbjct: 448 LDPALLRPGRFDRQITIDRPD 468
Score = 71.7 bits (168), Expect = 8e-14
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
E+ E V++ +++P + + G + RG + GPPG GKTLLAKA A E F+SV G E
Sbjct: 307 EIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEF 365
Query: 196 LTMWFGESEANVRDIFDKARRH 261
L M+ G + VRD+F AR++
Sbjct: 366 LEMFVGVGPSRVRDLFATARKN 387
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 509 REAILRANLRKSPIAKDVDL--SYIAKVTQGFSGAEXTEICQRACKLGIR 652
RE I + +L+ A ++DL +A +T GF+GA+ +C + R
Sbjct: 472 REQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAAR 521
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 74.1 bits (174), Expect = 2e-14
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFG--MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 189
+L + V +P+++P+ F G + +G+L YGPPGCGKT+LAKA+A + QA FI+V
Sbjct: 100 QLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVG 159
Query: 190 ELLTMWFGESEANVRDIFDKARR 258
L WFGES V +F AR+
Sbjct: 160 LLTDKWFGESNKLVDALFTLARK 182
Score = 41.1 bits (92), Expect = 1e-04
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 264 PCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGM-GAKKNVFIIGATNRPDII 440
P ++F DE+D+ + + + ++ DG+ + V ++GATNRP I
Sbjct: 185 PTIIFIDEIDTFLRQRQRTDHEAMAQ---IKAEFMSMWDGLLSGQSRVLVLGATNRPADI 241
Query: 441 DPAILRPGRLDQLIYIPLPDEKSAR 515
D AI R R+ ++ IPLP+ + R
Sbjct: 242 DEAIRR--RMPKVFSIPLPNAEQRR 264
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 72.5 bits (170), Expect = 5e-14
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +1
Query: 19 LQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 198
L+E V YP PD F +P+RG+L +GPPG GKT+LA+A+A E ++ F S+ L
Sbjct: 471 LKEAVVYPFLRPDLFQGL-REPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLT 529
Query: 199 TMWFGESEANVRDIFDKARR 258
+ + GESE VR +F A++
Sbjct: 530 SKFLGESEKLVRALFTLAKK 549
Score = 32.3 bits (70), Expect = 0.063
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 402 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSAR 515
V ++ ATN P ID A R R + YIPLPDE + R
Sbjct: 606 VLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRR 641
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 72.1 bits (169), Expect = 6e-14
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +1
Query: 19 LQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 198
L+E V YP P+ F +P +G+L +GPPG GKT+LA+A+A E +A F S+ L
Sbjct: 391 LKEAVIYPFLRPELFQGL-REPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLT 449
Query: 199 TMWFGESEANVRDIFDKARR 258
+ + G+SE VR +F+ A+R
Sbjct: 450 SKYLGDSEKLVRALFEVAKR 469
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 71.7 bits (168), Expect = 8e-14
Identities = 36/86 (41%), Positives = 51/86 (59%)
Frame = +3
Query: 246 QGSSASPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATN 425
+G + ++ FDELD+I K V+NQ+L +MDG+ N+ +IG TN
Sbjct: 367 RGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQ-VVNQLLAKMDGVDQLNNILVIGMTN 425
Query: 426 RPDIIDPAILRPGRLDQLIYIPLPDE 503
R D+ID A+LRPGRL+ + I LPDE
Sbjct: 426 RKDMIDEALLRPGRLEVHMEISLPDE 451
Score = 63.3 bits (147), Expect = 3e-11
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 52 PDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS-VKGPELLTMWFGESEAN 228
P K G+ +G+L YGPPG GKTL+A+ I A V GPE+L + G+SE N
Sbjct: 293 PGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEEN 352
Query: 229 VRDIFDKARRHLR 267
VR +F A R R
Sbjct: 353 VRKLFADAEREYR 365
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 548 IAKDVDLSYIAKVTQGFSGAEXTEICQRACKLGIRR 655
+ DVD+ +A +T+ FSGAE + + A R
Sbjct: 471 LENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYR 506
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 65.3 bits (152), Expect = 7e-12
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +1
Query: 16 ELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 195
EL+E+V + + P F + G + RGVL GPPG GKT+LA+A+A E F + G +
Sbjct: 278 ELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQF 336
Query: 196 LTMWFGESEANVRDIFDKARR 258
M+ G VR++F AR+
Sbjct: 337 DEMYVGVGAKRVRELFAAARK 357
Score = 64.1 bits (149), Expect = 2e-11
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +3
Query: 261 SPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKN----VFIIGATNR 428
+P ++F DELD+I + +NQ+L ++DG ++ V IGATN
Sbjct: 359 APSIIFIDELDAIGQKRNARDAAHMRQ---TLNQLLVDLDGFSKNEDLAHPVVFIGATNF 415
Query: 429 PDIIDPAILRPGRLDQLIYIPLPD 500
P+ +DPA+ RPGR D+ I++PLPD
Sbjct: 416 PESLDPALTRPGRFDRHIHVPLPD 439
Score = 43.2 bits (97), Expect = 3e-05
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 479 HLH-PAAGREVREAILRANLRKSPIAKDVDLSYIAKVTQGFSGAEXTEICQRA 634
H+H P R AIL + R P+ KDVDLS IA+ T GF+GA+ + +A
Sbjct: 432 HIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQA 484
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 39.9 bits (89), Expect = 3e-04
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 363 ILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 488
+L +DG+ + I TN P+ +DPA++RPGR+D Y+
Sbjct: 327 LLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVKAYL 368
Score = 33.9 bits (74), Expect = 0.021
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 73 GMQPSRGVLFYGPPGCGKTLLAKAIANE 156
G+ RG L YGPPG GKT A+A E
Sbjct: 238 GIPYRRGYLLYGPPGSGKTSFLYALAGE 265
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 33.5 bits (73), Expect = 0.027
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 58 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC--QANFISVKGPELLTMWFGESEA 225
K KFG +GVLF G G GKT LA AIA E + F + G E+ + ++EA
Sbjct: 58 KSKKFG---GKGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEA 112
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 33.5 bits (73), Expect = 0.027
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 79 QPSRGVLFYGPPGCGKTLLAKAIAN 153
QP LF GP G GKTLL KA+A+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALAS 636
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 33.5 bits (73), Expect = 0.027
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 58 KFLKFGMQPSRGVLFYGPPGCGKTLL 135
+FL F + +R V+F GPPG GK++L
Sbjct: 2504 EFLNFSLTKNRCVIFCGPPGSGKSML 2529
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 33.1 bits (72), Expect = 0.036
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 58 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN--FISVKGPELLTMWFGESEA 225
K ++ G R +L GPP GKT +A +A ++ F+++ E+ ++ ++EA
Sbjct: 56 KMIQEGRIAGRAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEA 113
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 29.9 bits (64), Expect = 0.34
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 79 QPSRGVLFYGPPGCGKTLLAKAIA 150
+P LF GP G GKT L KA+A
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALA 553
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 29.9 bits (64), Expect = 0.34
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 55 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 156
+KF+ P +LFYGPPG GKT A A +
Sbjct: 48 EKFISSNRVPH--MLFYGPPGTGKTSTILACARK 79
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 0.45
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 64 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 180
L FG+ V GP G GKT L K I + Q + SV
Sbjct: 613 LNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSV 651
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 29.1 bits (62), Expect = 0.59
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 85 SRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARRHL 264
SR +L GP GCGK+ + +A E + I P L E++ + +K R +
Sbjct: 105 SRLLLICGPSGCGKSTAVQVLAKELGYSLIEWLNPMNLKE-PSNQESDTLSLTEKFSRFM 163
Query: 265 RAC 273
C
Sbjct: 164 SLC 166
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 299 DGVQLVEEQHARRCRRALSKMSRTFASDSPNHMVSSSGPFTDIKL 165
DGV++ + + RR+LS S + SDS S++ PF + +
Sbjct: 465 DGVEMRSVRKSSDLRRSLSAASLSSLSDSSRRSSSAANPFQSMSI 509
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 371 RDGRHGRQEERLH--HRCHKQTGHHRPGHPASRPSGPAHLHPAAGREVRE 514
R+ H R+ H HR K H R P+SR +G H +E E
Sbjct: 20 RETNHSRRHRHHHSRHRESKHGRHDRSERPSSREAGDRSRHERFSKEPLE 69
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 73 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 171
G + + GPPG GKT + K+IA+ F
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREF 599
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 94 VLFYGPPGCGKTLLAKAIANE 156
+LFYG PG GKT A++ E
Sbjct: 55 MLFYGSPGTGKTSTILALSRE 75
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 73 GMQPSRGVLFYGPPGCGKTLLAKAIA 150
G+ + VL GPPG GKT A +A
Sbjct: 405 GLGLYKAVLLSGPPGIGKTTAAHLVA 430
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 76 MQPSRGVLFYGPPGCGKTLLAKAIANE 156
+Q + +L G PG GKT L A+A E
Sbjct: 1556 LQVLKPILLEGSPGVGKTSLITALARE 1582
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 79 QPSRGV-LFYGPPGCGKTLLAKAIANECQANFI 174
QP + V + GP G GKT +AKA++ + +I
Sbjct: 11 QPYKYVFVVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 58 KFLKFGMQPSRGVLFYGPPGCGKT 129
K +KF + L +GPPG GKT
Sbjct: 216 KAVKFSIAVKELSLIHGPPGTGKT 239
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 88 RGVLFYGPPGCGKTLL 135
+G+ YG GCGKT L
Sbjct: 119 KGIYLYGDVGCGKTAL 134
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/45 (24%), Positives = 16/45 (35%)
Frame = +2
Query: 353 HQPDPHRDGRHGRQEERLHHRCHKQTGHHRPGHPASRPSGPAHLH 487
H P H +++ HH+ K HH+ GP H
Sbjct: 382 HHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHQGPKEKH 426
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -2
Query: 415 PMMKTFFLAPMPSISVRIWLMTRSAAPPASDTEPPRDLAMESSSSKNNTH 266
P + FL+ +PS+ + + S+ PP + ++SS NNT+
Sbjct: 367 PFVSVAFLSLVPSVMFTMRYLALILRVQNSNMPPPAPRPVTNNSSNNNTN 416
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 190 LVPSLI*S*PDTRWRWPL 137
++ SL+ DT WRWPL
Sbjct: 199 IISSLVTEHSDTAWRWPL 216
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 94 VLFYGPPGCGKTLLAKAIANECQANFIS-VKGP 189
V GPPG GK+ L K++ IS + GP
Sbjct: 77 VAVMGPPGTGKSTLIKSLVRRYSKYTISQITGP 109
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 94 VLFYGPPGCGKTLLAKAIANECQANFISV 180
++ G PG GKT LA+ +A + I +
Sbjct: 11 IIICGTPGTGKTTLAEQVAETTELENICI 39
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 37 YPVEHPDKFLKFGMQPSRG-VLFYGPPGCGKT 129
Y V P + + + G L GPPG GKT
Sbjct: 1269 YGVNEPQAYAIYASSVNDGFTLIQGPPGTGKT 1300
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,439,307
Number of Sequences: 5004
Number of extensions: 44991
Number of successful extensions: 293
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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