Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0996X.Seq
(354 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_1001 + 22149921-22150068,22150613-22150890,22150979-22151533 30 0.60
04_04_0347 + 24564589-24565296 30 0.60
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 29 0.79
06_03_0165 - 17399535-17400178,17400378-17400522 29 1.1
04_03_0712 + 18959770-18959930,18961115-18961238 29 1.1
04_03_0798 + 19798982-19799860 29 1.4
02_04_0398 - 22598895-22599100,22599865-22599943 28 2.4
07_01_0282 - 2070027-2070041,2074763-2075062,2075154-2075722,207... 27 3.2
01_01_0206 - 1770622-1771347 27 3.2
05_06_0098 + 25560158-25560925 27 4.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 27 4.2
07_01_0601 + 4464745-4465010,4465274-4466582 27 5.6
06_02_0104 - 11857734-11857840,11858361-11858463 27 5.6
03_05_0205 - 21965782-21965979,21969169-21969417 27 5.6
04_04_0140 - 23073032-23073130,23073270-23073338,23073448-230735... 26 7.4
03_06_0657 + 35333866-35333965,35334089-35334429 26 7.4
03_05_0928 + 28888405-28889121 26 7.4
02_04_0404 + 22626709-22628601 26 7.4
01_07_0211 - 42013468-42013731 26 7.4
10_08_0226 - 16001958-16002527 26 9.8
08_02_1223 - 25381462-25381575,25381822-25382061,25382570-253827... 26 9.8
07_03_1136 + 24218601-24218734,24218769-24219906 26 9.8
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 26 9.8
03_04_0159 + 17832666-17832938,17833634-17833873 26 9.8
03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906 26 9.8
01_06_1615 - 38652493-38652668,38652896-38653043,38653125-386533... 26 9.8
>10_08_1001 + 22149921-22150068,22150613-22150890,22150979-22151533
Length = 326
Score = 29.9 bits (64), Expect = 0.60
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 319 GCPPAQQQKGVVGRPATSIILVLEPNQINHSAPQRPTMQRMARASPNVNTVGAVGSG 149
G PPA + KG++ + ++S LV +Q++ P+ SP V+ + G G
Sbjct: 160 GEPPAAKAKGMISKVSSSSSLVTVEHQLSSRGNASPSFTPTNNGSPLVDEMFVGGGG 216
>04_04_0347 + 24564589-24565296
Length = 235
Score = 29.9 bits (64), Expect = 0.60
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 347 DGE*GAKPDGVPPSAAAEGGGRPTSYQHYPGP 252
DG + P P +A EG P+ Y HYP P
Sbjct: 173 DGRHQSPPPPPSPPSADEGAQAPSYYGHYPSP 204
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 29.5 bits (63), Expect = 0.79
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 314 PPSAAAEGGGRPTSYQHYPGPGAESDQ 234
PP+A+ GG P SY P P A+ Q
Sbjct: 28 PPAASPPSGGAPASYNSVPPPPADEIQ 54
>06_03_0165 - 17399535-17400178,17400378-17400522
Length = 262
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 314 PPSAAAEGGGRPTSYQHYPGPGAESD 237
P +AAA GGG+ QHYP A ++
Sbjct: 157 PAAAAASGGGQLHHQQHYPSADAAAE 182
>04_03_0712 + 18959770-18959930,18961115-18961238
Length = 94
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 233 VDLIRLQDQDNAGSWSADHPLLLLRWGAPRPALHL 337
V + + ++ S P LLRWGAP PA L
Sbjct: 21 VAMANRSNNSSSSSGRTSSPAALLRWGAPEPAPRL 55
>04_03_0798 + 19798982-19799860
Length = 292
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 332 AKPDGVPPSAAAEGGGRPTSYQHYPGPGAESD 237
A PD +PPS GGG +S ++ G G D
Sbjct: 184 AMPDDLPPSVTGGGGGFASSDEYSSGGGGMVD 215
>02_04_0398 - 22598895-22599100,22599865-22599943
Length = 94
Score = 27.9 bits (59), Expect = 2.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 311 PSAAAEGGGRPTSYQHYP 258
P A +GGG P Y HYP
Sbjct: 26 PQANKQGGGGPPGYGHYP 43
>07_01_0282 -
2070027-2070041,2074763-2075062,2075154-2075722,
2075812-2076337
Length = 469
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 347 DGE*GAKPDGVPPSAAAEGGGRPTSYQHYPGPGAE 243
DGE P PPS +AEG P + P GA+
Sbjct: 422 DGEDPPPPPPHPPSPSAEGSASPPTTPGTPTTGAD 456
>01_01_0206 - 1770622-1771347
Length = 241
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 329 KPDGVPPSAAAEGGG-RPTSYQHYPG 255
KP A GGG +PTSYQ PG
Sbjct: 86 KPSPCKQQQATSGGGVKPTSYQRRPG 111
>05_06_0098 + 25560158-25560925
Length = 255
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 314 PPSAAAEGGGRPTSYQHYPGPGAESDQP 231
P SAAA P+S++ P P + S QP
Sbjct: 17 PSSAAAAASSSPSSHRPPPPPPSSSSQP 44
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 314 PPSAAAEGGGRPTSYQHYPGPGAESDQPF 228
PP AA GGG P GP A PF
Sbjct: 373 PPGAAGRGGGGPPPPALPGGPRARGPPPF 401
>07_01_0601 + 4464745-4465010,4465274-4466582
Length = 524
Score = 26.6 bits (56), Expect = 5.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 286 PPPSAAALGGTPSGFAP 336
PPP+AAA G+PS P
Sbjct: 196 PPPAAAAAAGSPSATTP 212
>06_02_0104 - 11857734-11857840,11858361-11858463
Length = 69
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -2
Query: 350 IDGE*GAKPDGVPPSAAAEG--GGRPTSYQHYP 258
+DG P+G +AA G GG P +Y HYP
Sbjct: 37 VDGMKVELPEGRKGAAAVSGYGGGWPGTYGHYP 69
>03_05_0205 - 21965782-21965979,21969169-21969417
Length = 148
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 314 PPSAAAEGGGRPTSYQ 267
PPSAAA GG RP Y+
Sbjct: 20 PPSAAACGGARPAVYR 35
>04_04_0140 -
23073032-23073130,23073270-23073338,23073448-23073539,
23073637-23074550,23074646-23074779,23075003-23075058,
23077556-23077646
Length = 484
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 305 AAAEGGGRPTSYQHYPGPGAES 240
AAAEGGG SY + G A+S
Sbjct: 241 AAAEGGGGGVSYAYKDGTAADS 262
>03_06_0657 + 35333866-35333965,35334089-35334429
Length = 146
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 320 GVPPSAAAEGGGR 282
G PP+AAA GGGR
Sbjct: 100 GAPPAAAAAGGGR 112
>03_05_0928 + 28888405-28889121
Length = 238
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 320 GVPPSAAAEGGGRPTSYQHYPGPG 249
GV P A GGG P Y H G
Sbjct: 78 GVAPMLPAPGGGGPPGYMHMAAMG 101
>02_04_0404 + 22626709-22628601
Length = 630
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 335 GAKPDGVPPSAAAEGGGR 282
GA P PP+AA GGGR
Sbjct: 87 GAAPSSSPPAAAPCGGGR 104
>01_07_0211 - 42013468-42013731
Length = 87
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 317 VPPSAAAEGGGRPTSYQHYPG 255
+PPS+A GGGRP + G
Sbjct: 64 LPPSSATTGGGRPVASSEETG 84
>10_08_0226 - 16001958-16002527
Length = 189
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 308 SAAAEGGGRPTSYQHYPGPGAESD 237
SAAA+GG PTS Y A D
Sbjct: 139 SAAADGGASPTSSPPYANANATGD 162
>08_02_1223 -
25381462-25381575,25381822-25382061,25382570-25382707,
25383397-25383849,25384528-25385010
Length = 475
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 281 ADHPLLLLRWGAPRPAL 331
A PLLLLRW RP+L
Sbjct: 74 AGKPLLLLRWPGRRPSL 90
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 335 GAKPDGVPPSAAAEGGGRPTSYQHYPGPGAESDQP 231
G P +PP A GG RP + PG G P
Sbjct: 114 GGGPPSLPPGAGGGGGARPPA----PGGGGGGGAP 144
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 335 GAKPDGVPPSAAAEGGGRPTS 273
G +P S++A GGGRPT+
Sbjct: 43 GGRPSTPSSSSSAAGGGRPTT 63
>03_04_0159 + 17832666-17832938,17833634-17833873
Length = 170
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 320 GVPPSAAAEGGGRPTSYQHYPGPGA 246
GV P+AAA GGR + P PGA
Sbjct: 51 GVVPAAAAAAGGRALR-ERRPAPGA 74
>03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906
Length = 190
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 311 PSAAAEGGGRPTSYQHYPGPG 249
P A GG RPT+ H PG G
Sbjct: 76 PMVGASGGVRPTNPGHSPGIG 96
>01_06_1615 -
38652493-38652668,38652896-38653043,38653125-38653340,
38653572-38653701,38653801-38653823,38654238-38654292,
38654370-38654428,38654516-38654569
Length = 286
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 326 PDGVPPSAAAEGGGRPTSYQHYPGP 252
P G+P A+G GR T + Y GP
Sbjct: 240 PTGLPKRHVAQGPGRYTHTRPYDGP 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,864,065
Number of Sequences: 37544
Number of extensions: 211039
Number of successful extensions: 1176
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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