Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0996X.Seq
         (354 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95012-1|AAB82768.1|  237|Homo sapiens neural retinal-specific l...    29   5.4  
M95925-1|AAA96828.1|  237|Homo sapiens leucine zipper protein.         29   5.4  
M81840-1|AAA59948.1|  237|Homo sapiens nrl protein.                    29   5.4  
BT006942-1|AAP35588.1|  237|Homo sapiens neural retina leucine z...    29   5.4  
BC012395-1|AAH12395.1|  237|Homo sapiens neural retina leucine z...    29   5.4  
U44378-1|AAA91041.1|  552|Homo sapiens Dpc4 protein.                   28   7.2  
BC002379-1|AAH02379.1|  552|Homo sapiens SMAD family member 4 pr...    28   7.2  
AF045447-1|AAC03051.1|  552|Homo sapiens deleted in pancreatic c...    28   7.2  
AB043547-1|BAB40977.1|  436|Homo sapiens SMAD4 protein.                28   7.2  
U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine...    28   9.5  
J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.                   28   9.5  
EF560746-1|ABQ59056.1|  979|Homo sapiens KIAA1394 protein protein.     28   9.5  
AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.         28   9.5  
AB037815-1|BAA92632.1| 1003|Homo sapiens KIAA1394 protein protein.     28   9.5  

>U95012-1|AAB82768.1|  237|Homo sapiens neural retinal-specific
           leucine zipper protein protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 280 GRPPPSAAALGGTPSGFAPYSPS 348
           GRP P  A+LG TP    P SP+
Sbjct: 30  GRPGPPTASLGSTPYSSVPPSPT 52


>M95925-1|AAA96828.1|  237|Homo sapiens leucine zipper protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 280 GRPPPSAAALGGTPSGFAPYSPS 348
           GRP P  A+LG TP    P SP+
Sbjct: 30  GRPGPPTASLGSTPYSSVPPSPT 52


>M81840-1|AAA59948.1|  237|Homo sapiens nrl protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 280 GRPPPSAAALGGTPSGFAPYSPS 348
           GRP P  A+LG TP    P SP+
Sbjct: 30  GRPGPPTASLGSTPYSSVPPSPT 52


>BT006942-1|AAP35588.1|  237|Homo sapiens neural retina leucine
           zipper protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 280 GRPPPSAAALGGTPSGFAPYSPS 348
           GRP P  A+LG TP    P SP+
Sbjct: 30  GRPGPPTASLGSTPYSSVPPSPT 52


>BC012395-1|AAH12395.1|  237|Homo sapiens neural retina leucine
           zipper protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 280 GRPPPSAAALGGTPSGFAPYSPS 348
           GRP P  A+LG TP    P SP+
Sbjct: 30  GRPGPPTASLGSTPYSSVPPSPT 52


>U44378-1|AAA91041.1|  552|Homo sapiens Dpc4 protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 TESKVQSRTGCPPAQQQKGVVGRPAT 269
           +E  +Q  +G  P QQQ G  G+PAT
Sbjct: 234 SEGLLQIASGPQPGQQQNGFTGQPAT 259


>BC002379-1|AAH02379.1|  552|Homo sapiens SMAD family member 4
           protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 TESKVQSRTGCPPAQQQKGVVGRPAT 269
           +E  +Q  +G  P QQQ G  G+PAT
Sbjct: 234 SEGLLQIASGPQPGQQQNGFTGQPAT 259


>AF045447-1|AAC03051.1|  552|Homo sapiens deleted in pancreatic
           carcinoma protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 TESKVQSRTGCPPAQQQKGVVGRPAT 269
           +E  +Q  +G  P QQQ G  G+PAT
Sbjct: 234 SEGLLQIASGPQPGQQQNGFTGQPAT 259


>AB043547-1|BAB40977.1|  436|Homo sapiens SMAD4 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 TESKVQSRTGCPPAQQQKGVVGRPAT 269
           +E  +Q  +G  P QQQ G  G+PAT
Sbjct: 234 SEGLLQIASGPQPGQQQNGFTGQPAT 259


>U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine
           receptor protein.
          Length = 5038

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 272 SWSADHPLLLLRWGAPRPALHLTLRQY 352
           SWS  H    LRWG P    H+T  QY
Sbjct: 267 SWSGSH----LRWGQPLRVRHVTTGQY 289


>J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.
          Length = 5032

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 272 SWSADHPLLLLRWGAPRPALHLTLRQY 352
           SWS  H    LRWG P    H+T  QY
Sbjct: 267 SWSGSH----LRWGQPLRVRHVTTGQY 289


>EF560746-1|ABQ59056.1|  979|Homo sapiens KIAA1394 protein protein.
          Length = 979

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 325 RTGCPPAQQQKGVVGRPATSIILVLE 248
           RTGCP A+    V+G P+T + ++LE
Sbjct: 119 RTGCPGAEVTLCVLGSPSTFLPVLLE 144


>AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.
          Length = 505

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 286 PPPSAAALGGTPSGFAPYSPSIL 354
           PPP  A L   PSG  P  PS+L
Sbjct: 344 PPPPPALLSSAPSGPPPPPPSVL 366


>AB037815-1|BAA92632.1| 1003|Homo sapiens KIAA1394 protein protein.
          Length = 1003

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 325 RTGCPPAQQQKGVVGRPATSIILVLE 248
           RTGCP A+    V+G P+T + ++LE
Sbjct: 143 RTGCPGAEVTLCVLGSPSTFLPVLLE 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,611,118
Number of Sequences: 237096
Number of extensions: 1070383
Number of successful extensions: 4347
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4344
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)