Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0992.Seq
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 111 4e-25
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 111 4e-25
05_01_0043 - 295041-295173,296252-296537,296616-296697 111 6e-25
01_07_0267 + 42410174-42410252,42410679-42411097 107 7e-24
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 99 2e-21
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 57 2e-08
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 36 0.035
04_01_0244 - 3194141-3195091,3195301-3195312 33 0.25
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382... 32 0.58
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 31 0.76
07_01_0469 - 3552409-3553368 31 1.3
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 30 1.8
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 30 1.8
09_06_0081 + 20745627-20748144,20748211-20748308 29 3.1
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 3.1
10_08_0401 + 17629912-17630376 29 4.1
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 4.1
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 29 4.1
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 29 4.1
10_07_0029 + 12031711-12032464,12044289-12044386 29 5.4
09_06_0223 + 21659549-21659729,21659888-21659979 29 5.4
07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520 29 5.4
04_04_1125 + 31085106-31085714 29 5.4
03_01_0570 - 4205739-4205776,4205846-4205897,4205939-4206067,420... 29 5.4
03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826 28 7.1
01_06_1497 + 37783779-37783914,37783999-37784216,37784652-377852... 28 7.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.4
06_01_0785 - 5873244-5873357,5873458-5873562,5874333-5874424,587... 28 9.4
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 28 9.4
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 111 bits (268), Expect = 4e-25
Identities = 56/87 (64%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 LVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 431
L++AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+
Sbjct: 70 LIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPK 129
Query: 432 LFVGMILILIFAEVLGLYGLIVAIYLT 512
LFVGMILILIFAE L LYGLIV I L+
Sbjct: 130 LFVGMILILIFAEALALYGLIVGIILS 156
Score = 101 bits (241), Expect = 8e-22
Identities = 43/58 (74%), Positives = 53/58 (91%)
Frame = +1
Query: 82 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 255
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYG
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYG 69
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +3
Query: 321 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 500
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 14 FGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73
Query: 501 IYLTQNKRPEHTP 539
+ ++ P+ P
Sbjct: 74 VIISTGINPKAKP 86
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 111 bits (268), Expect = 4e-25
Identities = 56/87 (64%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 LVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 431
L++AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+
Sbjct: 70 LIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPK 129
Query: 432 LFVGMILILIFAEVLGLYGLIVAIYLT 512
LFVGMILILIFAE L LYGLIV I L+
Sbjct: 130 LFVGMILILIFAEALALYGLIVGIILS 156
Score = 101 bits (242), Expect = 6e-22
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = +1
Query: 82 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 255
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYG
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYG 69
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +3
Query: 321 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 500
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 14 FGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73
Query: 501 IYLTQNKRPEHTP 539
+ ++ P+ P
Sbjct: 74 VIISTGINPKAKP 86
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 111 bits (267), Expect = 6e-25
Identities = 56/87 (64%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 LVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 431
L++AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR AQQP+
Sbjct: 71 LIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPK 130
Query: 432 LFVGMILILIFAEVLGLYGLIVAIYLT 512
LFVGMILILIFAE L LYGLIV I L+
Sbjct: 131 LFVGMILILIFAEALALYGLIVGIILS 157
Score = 101 bits (241), Expect = 8e-22
Identities = 43/58 (74%), Positives = 53/58 (91%)
Frame = +1
Query: 82 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 255
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYG
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYG 70
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +3
Query: 321 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 500
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 15 FGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74
Query: 501 IYLTQNKRPEHTP 539
+ ++ P+ P
Sbjct: 75 VIISTGINPKAKP 87
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 107 bits (258), Expect = 7e-24
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 LVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 431
L++AV+I + A Y + G +HL AGLA G LAAG AIG+VGDAGVR AQQP+
Sbjct: 70 LIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAIGVVGDAGVRANAQQPK 129
Query: 432 LFVGMILILIFAEVLGLYGLIVAIYLT 512
LFVGMILILIFAE LGLYGLIV I L+
Sbjct: 130 LFVGMILILIFAEALGLYGLIVGIILS 156
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/64 (64%), Positives = 52/64 (81%)
Frame = +1
Query: 64 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 243
N + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPEL+MKSI+PVVMAG++
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 244 AIYG 255
IYG
Sbjct: 66 GIYG 69
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +3
Query: 312 YKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGL 491
+ GFI GA LA+ FS + A + G +P L + I+ ++ A VLG+YGL
Sbjct: 13 FLGFI--GAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVLGIYGL 70
Query: 492 IVAIYLTQNKRPEHTP 539
I+A+ +T P P
Sbjct: 71 IIAVIITTGINPTAMP 86
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 99 bits (238), Expect = 2e-21
Identities = 42/58 (72%), Positives = 53/58 (91%)
Frame = +1
Query: 82 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 255
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYG
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYG 71
Score = 61.7 bits (143), Expect(2) = 1e-20
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +3
Query: 255 LVVAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 410
L++AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGIVGDAGVR
Sbjct: 72 LIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 124
Score = 56.4 bits (130), Expect(2) = 1e-20
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3
Query: 405 VRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYLT 512
+R AQQP+LFVGMILILIFAE L LYGLIV I L+
Sbjct: 155 LRANAQQPKLFVGMILILIFAEALALYGLIVGIILS 190
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +3
Query: 321 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 500
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 16 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 75
Query: 501 IYLTQNKRPEHTP 539
+ ++ P+ P
Sbjct: 76 VIISTGINPKAKP 88
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +3
Query: 309 LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYG 488
L G+ +GL VGF+ L G +GI+G + AQ LFV +++I IF LGL+G
Sbjct: 100 LRAGYAIFASGLIVGFANLVCGVCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFG 159
Query: 489 LIVAIYLT 512
+IV I ++
Sbjct: 160 VIVGIIMS 167
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +3
Query: 321 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 500
F +G +++G S L A + I I G + + + PR+ ++ +IF E + +YG+IVA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 501 IYL 509
I L
Sbjct: 80 IIL 82
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +1
Query: 88 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 255
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYG 75
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 35.9 bits (79), Expect = 0.035
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 509 KVDGDDKSVKTQYFSENK-NKNHSDE*PRLLSSTTHACISHDAYGETGSQTRESYSQTST 333
KV+G + + E K +KN DE P LS+T C H+ YG+ G + + ++
Sbjct: 864 KVNGGEITSNCLSALEEKCSKNEHDEAPLGLSNT---CKEHE-YGDKGPENLTKPGEPAS 919
Query: 332 QVDEPFVKGVV 300
VD P+V G+V
Sbjct: 920 SVDVPYVNGIV 930
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -3
Query: 481 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAP 332
R T+A +RI++ P N P PA+P +P A PAA P AP
Sbjct: 196 RKTTTAPVRIQLAPRNP----PPPAAPAAPPVPPAVPAAPAPAPVHMSAP 241
>07_03_1215 +
24937016-24937229,24937418-24937623,24938135-24938207,
24938619-24938812
Length = 228
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 385 PMAKPAARPENPTAKPAPKWM 323
P AKPAA+P+ P KP P+ M
Sbjct: 91 PAAKPAAKPKKPPVKPLPEMM 111
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 245 PSTAGRG---CPDCWCPPGASQLPPLQRVHPLG 334
PST+G G W PPG +LPPL +H G
Sbjct: 30 PSTSGDGEARTIHYWAPPGEPRLPPLLLIHGFG 62
>07_01_0469 - 3552409-3553368
Length = 319
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 481 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPAP 332
R +T+A +RI++ P N PA+P +P A PA P P P P
Sbjct: 192 RKSTTAPVRIQLAPRNP----PPSAAPAAPPVPPAAPAV-PAAPALAPVP 236
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 282 ALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILI 455
AL+ P P+ +G + LG + V +GL +V A VRG GM+L+
Sbjct: 333 ALEAP---PMPRGSVGLGMAVRVAMAGLGTNRVAAVVSAAAVRGHNAGGGALEGMVLV 387
>06_03_1283 -
28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/75 (25%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Frame = -2
Query: 605 PSLCASSDSDNEHRGSEHGRREWC---VFRAFILCKVDGDDKSVKTQYFSENKNKNHSDE 435
P C SS H HG C ++ + CK + K + NH +E
Sbjct: 715 PKKCCSSSHHGSHAKKNHGVSHHCSDGPCKSMVSCK---ESSVAKNACHDHHHEHNHHEE 771
Query: 434 *PRLLSSTTHACISH 390
SS H C H
Sbjct: 772 PAHKHSSNQHGCHDH 786
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 460 IRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKPA 335
+R R PT+ A PR P P A PAA P P+ P+
Sbjct: 701 LRARRAPTSPPAA-ATPRAPTPPAAAAAAPAAPPALPSGLPS 741
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 412 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 314
P PA MP P P PT P P W PL
Sbjct: 132 PPPPARTPMPTPTPTPTP-TPTRPPVPVWAAPL 163
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 94 VMGAASAIIFSALGAAYGTAKSGTGIAA 177
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 418 AVPRTPASPTMPMAKPAARPENPTAKPAPKWMNPL 314
A P P P P PAA P P PAP+ P+
Sbjct: 219 APPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPM 253
>03_06_0209 -
32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 276 AGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 410
+GA EP P+ + G A+ F G AG A+G+VG++G R
Sbjct: 9 SGAAAEPPPTPVAR----YDRGGALIFGGRFAGVAVGVVGESGSR 49
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 234 GYYCHLRLVVAVLIAGALQEPANYP 308
GY CHLRL V+V + ++ EP + P
Sbjct: 560 GYNCHLRLDVSVPMTPSVAEPQSIP 584
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 481 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTA 344
R T+A +RI++ P N PA+P +P A PAA+ P +
Sbjct: 192 RKTTTAPVRIQLAPRNP----PPAAAPAAPPVPPAVPAAQAPAPAS 233
>09_06_0223 + 21659549-21659729,21659888-21659979
Length = 90
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 617 YRRRPSLCASSDSDNEHRGSEHGRRE 540
++RR S DNE +G +HGRRE
Sbjct: 35 WQRRKRDTNGSGKDNEGKGGQHGRRE 60
>07_03_0800 + 21600050-21600106,21601506-21602663,21603029-21603520
Length = 568
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = -3
Query: 598 CARLQTQIMSIEA--RSTGDGSGVCSGR 521
C+R++TQ+ ++A R+TG G G +GR
Sbjct: 529 CSRMKTQMSKMKAARRATGGGGGAAAGR 556
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 412 PRTPASPTMPMAKPAARPENPTAK 341
P TPA+PT P PA P PT K
Sbjct: 89 PATPATPTTP-PTPAPAPSTPTGK 111
>03_01_0570 -
4205739-4205776,4205846-4205897,4205939-4206067,
4206183-4206258,4206360-4206412,4206494-4206555,
4206624-4206734,4206813-4206979,4207089-4207268,
4207598-4207687,4207773-4207921,4208367-4208501,
4208575-4208630,4208790-4208823,4209409-4209519
Length = 480
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +2
Query: 545 VARAPSLYAHYLSLKTRTGM---VVAGSGSTLH-RVSEHPSTLVYYICSLLVFTYLQTGA 712
+ R+P + H LSL + GM +VA GS H + E+PS ++ + S+ + L+
Sbjct: 21 IGRSPRMQYHSLSLANQAGMEVDIVANGGSDPHLLLRENPSIHIHEMKSVQLTGILKISG 80
Query: 713 A 715
A
Sbjct: 81 A 81
>03_04_0170 - 17982970-17983410,17983535-17983672,17983815-17983826
Length = 196
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 324 IHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 428
+HL G+AVG GL G + GD R A+ P
Sbjct: 160 VHLDVGVAVGDQGLEVGLL--VAGDEAERAQARAP 192
>01_06_1497 +
37783779-37783914,37783999-37784216,37784652-37785202,
37785223-37786024
Length = 568
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 530 FRAFILCKVDGDDKSVKTQYFSENKNKNHSD 438
F +FI+ +DG K +F+ N N+ H D
Sbjct: 500 FSSFIISAIDGATKKSGASWFANNLNRAHLD 530
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 412 PRTPASPTMPMAKPAARPENPTAKPAPKWM 323
P PA P P AA NP A P P M
Sbjct: 727 PSAPAPPLPPPLPAAANKRNPPAPPPPPLM 756
>06_01_0785 -
5873244-5873357,5873458-5873562,5874333-5874424,
5874525-5874594,5875080-5875202,5875287-5875372,
5875547-5875648,5875874-5876096,5876217-5876282,
5876407-5876497,5876574-5876701,5877734-5877749,
5878171-5878318,5878440-5878511,5878586-5878690,
5879122-5879291,5880093-5880424
Length = 680
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = -3
Query: 502 MATISP*RPNTSAKIRIRIIPTNNLG--C*AVPR--------TPASPTMPMAKPAARPEN 353
+A+ISP R + SA +R +P L + PR T ASP A E
Sbjct: 5 LASISPARLSASASHLLRALPRIRLRRPLASAPRMSSSSSSTTAASPAAAAADGGGTGEK 64
Query: 352 PTAKPAPKWMNPL 314
P A P W +P+
Sbjct: 65 PVAAPYGSWRSPI 77
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 380 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 276
G G S+T VD+P VVGW GTS
Sbjct: 4 GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,952,332
Number of Sequences: 37544
Number of extensions: 586774
Number of successful extensions: 2386
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2380
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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